Paenibacillus beijingensis: VN24_25425
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Entry
VN24_25425 CDS
T03802
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pbj
Paenibacillus beijingensis
Pathway
pbj00450
Selenocompound metabolism
pbj00970
Aminoacyl-tRNA biosynthesis
pbj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbj00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VN24_25425
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VN24_25425
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbj01007
]
VN24_25425
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbj03016
]
VN24_25425
Enzymes [BR:
pbj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
VN24_25425
Amino acid related enzymes [BR:
pbj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VN24_25425
Transfer RNA biogenesis [BR:
pbj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VN24_25425
Prokaryotic type
Other AARSs
VN24_25425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA_bind
tRNA-synt_1e
Anticodon_3
Anticodon_1
tRNA-synt_1f
HVO_0758
DUF1272
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AJY77289
UniProt:
A0A0D5NPQ6
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All DBs
Position
complement(5600384..5602426)
Genome browser
AA seq
680 aa
AA seq
DB search
MSDHKKSFYITTPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGYDVWYLTGTDEHGQKIE
RKAQEKGTTPQQFVDEIVAGIKDLWRKLDISNDDFIRTTEERHKKVVEAIFDRLLKQGDI
YKGTYEGWYCTPCESFFLERQLVNGNCPDCGRPVELVKEESYFFRMSKYADRLLAFYEEN
PSFIQPESRKNEMINNFIKPGLEDLAVSRTTFDWGVKVPGDPKHVVYVWIDALSNYITAL
GYGTDDDAKYRQFWPADVHLVGKEIVRFHTIYWPIMLMALDLPLPKKVFAHGWLLMKDGK
MSKSKGNVIDPVMLIDRYGLDALRYFLLREVPFGADGTFTPEGFVERINFDLANDLGNLL
NRTVAMIGKYLDGIIPDYAGPVTAFDEPLAALSAETIRLAEEAMERMEFSVALSAIWQLV
SRTNKYIDETQPWTLAKDEAKRAELSSVMYHLAESLRIISILLGPFLTTTPQAMRRQLGV
EEGALTEWESAKQFGRLPGGTAVGKGEPLFPRLDVAEEVAFIAAAMSGGAAPTAAAASDA
SAEPKADDAGGAASAAGQPDAPGSGGESAPDIAPEIGIDEFAKVELRVAQVIAAEPVKKA
DKLLKLQLDLGFEQRQVVSGIAKFYTPEQMVGRKVICVTNLKPVKLRGELSQGMILAASA
GDQLTLATVPDDMPNGAVVK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcataaaaaaagcttttacattacaacgccgatctattatccgagcgacaag
ctgcatatcggccatgcctatacgacggtggctggcgacgccatggcccgttacaaaagg
ctgcgcggctacgatgtctggtatctgaccggaacggacgagcacggccaaaaaatcgaa
cgcaaagcgcaggaaaaggggacgaccccgcagcagtttgtcgacgaaatcgttgccggc
atcaaagatttgtggcgaaagctggacatttccaacgacgacttcatccggacgaccgag
gagcgccacaaaaaggtggttgaggccatattcgaccgattgctgaagcagggagacatt
tataaagggacgtacgaaggctggtactgcacgccttgcgaatcgtttttcctcgaacgg
cagcttgtaaacggaaactgtccggactgcggacgtcccgtcgagcttgtgaaagaggaa
agctactttttccggatgagcaaatatgccgaccggctgcttgctttttatgaggagaac
ccttcattcatccagccggaatcgcgcaaaaacgaaatgatcaacaactttatcaagccc
ggtctcgaggacttggcggtatcccgcacgacgtttgattggggcgtcaaagttcctgga
gatccgaagcacgtcgtatacgtctggatcgatgcgctctccaactatattaccgcgctc
ggctacggtacggacgacgatgcgaaataccgccagttttggccggcggacgttcacctc
gtcggcaaggaaatcgtgcgcttccatacgatctattggccgatcatgctgatggcgctc
gatctgccgctgccgaaaaaagtgtttgcgcacggctggctgctgatgaaggacggcaaa
atgtccaaatcgaaagggaacgttatcgatccggttatgctgatcgaccgctacgggctg
gacgccctccgttatttcctgctgcgggaagtgccgttcggcgccgacggcacctttacg
ccggaggggtttgtggagcggatcaacttcgacctcgcgaacgacctcggcaacctgctg
aaccgtacggtagcgatgatcggcaaatatttggacggaatcattccggattatgccggt
cccgtgacggcattcgacgagccgctcgccgcgctttccgccgaaacgatccggctggcg
gaagaggcgatggagcggatggagttttccgtagcgctgtcggcgatctggcagcttgtc
agccgcacgaacaaatatatcgacgaaacccagccgtggacgctggcgaaggatgaggca
aagcgggcggagctctcctccgtcatgtatcatttggcggaatcgctgcgcatcatttcg
attctgctcgggccgttcctgacgacgacgccgcaggcgatgcgccgccagctcggcgta
gaagaaggggcgctcaccgaatgggaatccgccaagcagttcggacggcttcccggcggc
accgccgtcggcaaaggggagccgctcttcccgcgtctcgatgtcgccgaggaggtggcg
tttattgccgccgcgatgtccgggggagcggcgccgacagccgccgcggcttcggacgca
tccgccgaaccgaaagcggacgatgccggaggggcggcatcggcggcgggtcagccggac
gcacccggcagcggcggggagtccgctccggatatagcgccggaaatcggcatcgacgaa
tttgccaaagtcgagctgcgcgtcgctcaggtcattgcggccgagccggtgaagaaggcg
gataagctgctgaagctgcagctcgatcttgggtttgagcagcggcaggtcgtttccggc
atcgccaagttttacaccccggagcagatggtcggccgcaaagtcatttgcgttaccaat
ctgaagccggtgaagctgcggggcgaattgtcgcaagggatgattttggccgcttccgcg
ggcgatcagctgacgctcgccaccgttcccgacgatatgcctaacggagctgtcgtaaaa
taa
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