Paenibacillus baekrokdamisoli: Back11_06370
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Entry
Back11_06370 CDS
T06671
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03410
Base excision repair
pbk03430
Mismatch repair
pbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Back11_06370 (recJ)
03430 Mismatch repair
Back11_06370 (recJ)
03440 Homologous recombination
Back11_06370 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_06370 (recJ)
DNA repair and recombination proteins [BR:
pbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Back11_06370 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Back11_06370 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Back11_06370 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBH19292
UniProt:
A0A3G9IM40
LinkDB
All DBs
Position
726372..728819
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AA seq
815 aa
AA seq
DB search
MIRSKTRWTVASLDAEGEANAASLASALSLSPLVAKLLVQRGFDHVEAAARFLSGGLECL
HDPFLLKGMSEAVDRIRLAIDRGERVRIYGDYDADGVSSTTLMTYLFQRLEMSFDSYIPH
RTLEGYGLNNKAIELASELGVTLIVTVDTGISAVEQVAYAASLGIDVIVTDHHEPPHDLP
AALAIVNPKQEDCPYPFKGLAGVGVAFKLAQALLGEPPIEWTDVVALGTIADLMPLLDEN
RVLVRLGLEQLRNSEKPGFQALAEIAGVELSTITATDVAFGMAPRINAAGRLRHAGQAVH
LLTANDRETAGAAALILDQLNKERQLLVETIVNEAQAQWLEKCERAAKNGRPEPSVIVLA
ADSWNPGVVGIVASKFVEKQYKPTLVLGIHPDSGMCKGSARSIAGFDLHAALTECEELLD
HYGGHQAAAGMSLHRDKLDLFEERLSKLADEWLQEEDWIAKTSIDLACKLEDATLNVREQ
LALLEPFGMGNAAPKLLLQGAVVADQRTMGKENKHLKLSLSEDGRLLDAVGFGLGMLSDR
ISGGAAIELVGELTINEWNGQRKAQFLMQDIRVAHVQLFDHRYGAGSDYIASLHKLIQNA
KLTVGTVLVPLAVLQEALSFQQEFSLPEQLRICTYETFIGEPSNCPNLILFGRPPSASVL
IEAIHAAVELEVVYVLYEDQRITTDAGRRSGAPARPKKGKEQPVVLTEEPSFPTREKFGQ
LYQTLRRVCPIAVDGHKERLATMMAWPIEQISFILGVFHELELVITQENQLQLVLAPVKR
ELSDSVLYREEQRLSESEKMLFAETKELSAWIARL
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgttctaaaacacgctggacggtggcttcattggatgcagaaggagaggcgaat
gctgcttctttggcaagcgcattgtcactttcaccacttgtggctaagctgctagttcag
cgaggctttgatcatgtggaagcagctgcccgttttctcagcggcggtttggaatgcttg
catgatccttttttgttgaaaggaatgtctgaagccgtagaccgcatccgcttagctata
gatcgtggggagcgcgtgcggatatatggtgattacgatgcagatggtgtgtcctccacg
acattaatgacttacctgttccaacgtctagagatgtcatttgactcttatattccacat
cgtaccttggaaggctacggactcaataacaaagcgattgaacttgcatccgagcttggt
gttacgctaatcgttactgtagatacaggcattagtgcggttgagcaggtagcttacgcg
gctagtctcgggattgatgtcatagtgactgatcatcatgaaccgccccatgatcttcca
gccgccttagctatcgttaatccgaagcaagaagattgtccttatccatttaaaggattg
gcaggagtcggtgttgcattcaagctggcacaagctctgttgggtgaaccgccaatcgag
tggactgatgtcgtggcccttggtacgattgctgatcttatgccgcttcttgatgagaat
cgcgttcttgtaagacttggacttgagcagcttcggaatagtgagaagcctggcttccaa
gctttagctgagatcgctggtgttgaattatccacgattacagcaaccgatgtcgctttt
ggtatggcaccgcgaattaatgcagcaggccgtctgcggcatgctggacaggcggtacac
ttattaacggcgaatgatagagaaacagcgggagctgcagcattgattttagatcagctg
aataaggaaagacagctccttgtggagacgattgtcaatgaagcacaggcacagtggctg
gagaagtgtgagcgggctgcaaagaatggccgtcctgagccatctgttattgtcttggcg
gcagatagctggaaccctggcgttgtcggaatcgtcgcttctaaatttgttgagaaacaa
tacaagccgactcttgttcttggtattcatccagacagtggcatgtgtaagggctctgct
cgttccattgctggctttgacttacatgcggctcttacggaatgtgaggagcttcttgac
cactacggcggtcatcaggcagcggcaggcatgagcttgcacagagataagctggacctt
tttgaagaaagattgagcaagcttgctgatgaatggctgcaagaagaggattggatagcg
aagacctcaatcgatctcgcctgtaagctggaagacgccacattgaacgtaagggagcag
ttggctctgctggagccatttggtatggggaatgcagcgccgaagctgctgctgcaaggt
gcggttgtggctgatcaaaggacgatggggaaagaaaataaacatctgaagctttcatta
agtgaagatggcagacttctcgatgcagttggatttggtttaggaatgctatctgatcgg
atatcgggcggagcggcaattgagttggttggagagcttactattaatgaatggaatggc
cagcgtaaggcgcagtttctcatgcaggacatccgagttgctcatgtgcagttatttgat
catcgttatggggccggttccgattatatcgcttctcttcataagctgattcaaaatgca
aaactgaccgtaggaaccgtacttgttccattagcggtattgcaggaagccttatcgttc
caacaagaattctcattgccagaacagctgaggatttgcacctatgagacatttatcggt
gaaccttcaaattgtcccaatttaattctatttggcaggcccccaagcgcttcagttctt
attgaagccattcatgcggctgtagaacttgaagtcgtctatgtcctttatgaggatcag
aggataacaacagatgcaggtcgtcgatctggcgctccagcacgtcccaagaaagggaag
gagcagcctgtggtattaaccgaggagccctcttttcctacccgcgagaagttcggtcag
ctttaccagacgctgcgccgtgtatgtccgattgcagtggatggacataaggaacgctta
gcgaccatgatggcttggccaatagagcaaatttcattcatactaggtgtattccacgag
ttggagcttgttattacacaggaaaatcagctacaattggtgctggctccagttaaaaga
gagctgtcagattcggtgttatatcgagaagagcagcgactttcggaatcagagaaaatg
ttgtttgcagaaacgaaagagctgtctgcttggatagcgcggctataa
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