Paenibacillus baekrokdamisoli: Back11_12920
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Entry
Back11_12920 CDS
T06671
Symbol
serS_1
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Back11_12920 (serS_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbk01007
]
Back11_12920 (serS_1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbk03016
]
Back11_12920 (serS_1)
Enzymes [BR:
pbk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Back11_12920 (serS_1)
Amino acid related enzymes [BR:
pbk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Back11_12920 (serS_1)
Transfer RNA biogenesis [BR:
pbk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Back11_12920 (serS_1)
Prokaryotic type
Back11_12920 (serS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Nucleocap_ssRNA
Motif
Other DBs
NCBI-ProteinID:
BBH19947
UniProt:
A0A3G9ILX1
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All DBs
Position
1434977..1436251
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AA seq
424 aa
AA seq
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MLDIRTIRNRSEEVQQAADQKGINFDVLELIAIDDRRRALLTISETLRAERNKRSDKIKQ
LMIEHRREEASAERVIAQESLEKLRTVDLELRDVGAEFERLMLLVPNFTSPTTPVGTSDK
DNVEVRRTGEQPIFSFQPRNHVEIGQSLDILDLERGVKIGGSRQYVLKNNGLMLHRAVQQ
LALDLLIELGYTLLDVPIMVKEETLVASGFFPGHRDQTYAIQEEDKWLVGTAEVPLVSYY
SGEVLDLTKPMLLGAVSPCYRSEIGSAGRDVHGLYRVHQFAKVEQVVICQADLAQAEAIL
EQMTANAEKLLQLLELPYRVVAVCTGDMSQKNYKQYDLETWMPSRNSYGETHSASLLLDF
QTRRSRIRYRDETGQLQFAYTLNNTMVATPRILIPLLENHQQEDGSIYVPKALRPYMKGQ
EALR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttagacattcgtacgataagaaaccgatcagaagaggtgcagcaagcagcagatcag
aaagggataaatttcgatgtactggaactcattgcgattgatgatcgaagaagggcgctt
ctcacgataagtgaaacgcttcgggcagaacgtaataaacgatcagacaagattaagcag
ttgatgatcgagcaccgcagggaagaagctagtgcagagagggtaatcgctcaggaaagt
cttgagaagttaaggacagttgacttggagctgcgagatgtaggggcggaatttgagagg
ctgatgctgcttgtacctaatttcacttcacctacaacgcctgttggaacaagcgataag
gacaatgtagaggtaagaagaacgggagagcagccgatattcagcttccagcctagaaac
cacgttgaaatcggtcaaagcttggatattcttgatttggaacgtggggtcaaaattggc
gggtcgagacaatatgtgctcaaaaataatggtttgatgcttcatcgtgctgttcagcag
cttgctcttgatttgttgatagagctaggctataccctgcttgatgtaccgattatggtg
aaggaagagacgttggttgcgtcgggcttcttcccaggccatcgggatcaaacctatgcg
attcaagaggaagacaagtggctggttgggacggcggaagtgccgcttgtatcttattat
agcggtgaggtgctcgacttaactaagcctatgcttcttggggctgtaagcccttgttat
cgaagtgagattggatcagcaggacgcgatgtgcatggcctatatagagttcatcaattc
gcgaaagtagagcaggttgtgatttgtcaggctgatcttgcacaggcggaagcgatactt
gagcaaatgactgccaatgcggagaagctgctgcagcttcttgagcttccttatcgggtt
gttgctgtttgcacaggggatatgtcgcaaaagaattataagcaatatgatctggaaacc
tggatgccaagccgtaatagctacggagaaacacattcggcctcactgctgctcgacttt
cagaccagacgctcgcgtattcgttaccgggacgagacaggacagctgcagtttgcctat
acgctcaataacacaatggtggcaacgcctcgtattctaatcccattgctcgagaatcat
cagcaggaggatggatcgatctatgtaccaaaagcgctccgtccttatatgaaaggacag
gaagctcttcgttag
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