Paenibacillus baekrokdamisoli: Back11_21710
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Entry
Back11_21710 CDS
T06671
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbk
Paenibacillus baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbk03016
]
Back11_21710 (truB)
Enzymes [BR:
pbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Back11_21710 (truB)
Transfer RNA biogenesis [BR:
pbk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Back11_21710 (truB)
Prokaryotic type
Back11_21710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBH20826
UniProt:
A0A3G9IR15
LinkDB
All DBs
Position
complement(2384192..2385109)
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AA seq
305 aa
AA seq
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MDGILAVWKPAGWTSHDVVAKVRGLLRTKRIGHAGTLDPQVTGVLPLCIGRATRVVEYVQ
EKPKAYEAVLQFGLATDTEDLTGTVVSQVDEVVISEADIRRILTAFTGEIDQVPPMYSAV
QVGGKRLYELAREGQVIERQARKVTIYELELLALDLDKPHPTIRFSVQCSKGTYIRTLCV
DIGKALGVPAVMAELKRTMSAGFTEEQCLTMEEIEQLQASGELESKLLPADAALEHFPRC
TVNSETAQHAFQGKRVPLPSIADLALSGDNKQLIRLYREDGLFIGLFEREADTELLKAVK
VFTPA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacggtattttggccgtttggaaaccggctggctggacttcacatgatgtcgtagct
aaagttagaggattactgcggaccaagcgtattggccatgccggaacgcttgatccacag
gtaacgggtgttttaccgctctgtatagggcgggctacccgggttgtggaatatgtgcaa
gagaaaccaaaagcttatgaagcggttctgcaatttggacttgctaccgatacggaggac
ttaacaggtacggtagtatcacaagtcgatgaagtcgtgataagcgaagcagacattcgt
cgtatattgacagctttcactggagagatcgatcaagttccaccgatgtactccgctgtg
caggttgggggtaagcggctctatgagcttgcaagagaaggtcaagttattgaaagacaa
gccagaaaagtaacaatctacgaattggaattgttagcgctagatctggataagccgcat
cctacgattcgtttttccgttcagtgctccaaaggaacctatatccgtacactttgtgtc
gatattggaaaagcgcttggggttcctgctgtaatggctgagctcaaacgcacgatgtcc
gctggattcacggaagaacagtgtttgaccatggaggaaattgaacagctgcaagcctcc
ggtgagcttgaatctaagctgcttccggctgatgcggcgcttgaacatttccctcgttgt
acggttaattcggaaacggcacagcatgcttttcaagggaaacgtgttcctcttcctagt
attgctgacttagccctatctggcgacaataaacaactcattcgtttataccgagaagac
ggcctttttattggcctgtttgaacgggaggcggacaccgaattactaaaagcagtaaag
gtgtttacgccagcttaa
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