Paenibacillus baekrokdamisoli: Back11_25390
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Entry
Back11_25390 CDS
T06671
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pbk
Paenibacillus baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbk03009
]
Back11_25390 (rluD)
Enzymes [BR:
pbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Back11_25390 (rluD)
Ribosome biogenesis [BR:
pbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Back11_25390 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
MS_C
Motif
Other DBs
NCBI-ProteinID:
BBH21194
UniProt:
A0A3G9JDG0
LinkDB
All DBs
Position
complement(2744568..2745539)
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AA seq
323 aa
AA seq
DB search
MNETNKASMTDSSLFNEEPLEFVVGETEAGERLDKYVTESMENDSISRTQVQDWIRTGAV
LVNGQQVKPNYKLNAADQLTVVIPEPEAAVIVPEAIELDIAYEDSDVIVMNKPRGMVVHP
APGHPSGTIVNALMYHCQDLSGINGVMRPGIVHRIDKDTSGLLMAAKNDLAHGSLAGQLK
AHTVTRKYIALVHGNLPHEHGTIDAPIGRDPNDRKMFTVIERGSKRAVTHFAVLERFGDY
TLVELQLETGRTHQIRVHMKYIGHPLAGDPVYGRTKSRTIALKGQALHAAILGFNHPRTG
EYLEFEAPIPADLEHELTILRVR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacaaacaaagcgagcatgacggacagcagtctatttaatgaagagccttta
gaatttgtcgtcggtgagaccgaggcaggtgaacggcttgataaatatgtaacggaaagc
atggagaatgactccatctcaagaacgcaggtgcaagattggattagaaccggggcagtc
ctagtcaacgggcagcaggtcaaaccgaactacaagcttaacgccgctgatcagctgacg
gttgttataccagaacctgaagcagctgtaattgtacccgaggccattgagcttgatatt
gcttatgaggacagcgatgtcattgtgatgaataaaccacggggcatggttgtgcatcct
gcaccaggtcatccttctggtacaatcgtgaatgcactcatgtatcattgccaggactta
tccgggattaatggtgtgatgagaccaggaatcgttcaccgaattgataaagacacatca
ggtcttctcatggcagccaagaatgatcttgctcatggctcgcttgccggtcagctcaag
gcacatacggttacacgcaaatatattgcgcttgttcatgggaatttacctcatgagcat
ggcacgatagatgctccaatcggtcgtgatccgaatgatcgtaaaatgtttaccgttatc
gagcgcggcagcaaaagagcggttacccattttgccgtgcttgagcggtttggtgattat
acgcttgttgagctgcagctcgaaaccggacgaacacatcagatccgtgttcatatgaag
tacatcggacatccgcttgctggtgaccctgtgtatggacgtaccaagagcagaaccatt
gcacttaaggggcaagctcttcacgcagctattctcggattcaatcatcctcgtacaggt
gaatatttggaattcgaagcgccaattcctgctgatctcgagcatgagctaaccatattg
cgagttcgttag
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