Paenibacillus baekrokdamisoli: Back11_26390
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Entry
Back11_26390 CDS
T06671
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pbk
Paenibacillus baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_26390 (sbcD)
DNA repair and recombination proteins [BR:
pbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Back11_26390 (sbcD)
Archaeal homologous recombinant proteins
Back11_26390 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF2379
Motif
Other DBs
NCBI-ProteinID:
BBH21294
UniProt:
A0A3G9JDQ8
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Position
complement(2847864..2849114)
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AA seq
416 aa
AA seq
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MDKRVGKQTMRILHTADWHFGRSLEGRSRLQEQEAFVDELAAIVKDEAIDLVLLAGDIYD
SVNPPAAAEQLFYEALSRLSDGGKRTVAVIAGNHDHPERVSASAPLASLSNIRLIGMPTD
EPMIVDVARTGERAIIAGLPYPSESRLRELLSEATDETVLRSAYSERVGRLMAKLGESFR
ADTVNLAMSHIYVLGGLETDSERPIQIGGAYTVDPSALRVGAQYVALGHLHRPQRVDGDE
RMRYSGSPLAYSFSEAGQAKSVVVMDAKPGSLIEPREVLLSSGRPLVRWVAKGGLTEVHS
WLEEGRDARAWIDLDVWMTESMTLQHIQQLRRQHEGLVHIRPVYPETAASAEVDTRSREQ
LPAEELFRRFFSRQTGGAEPDVDTVQLFLELIAEDDERTAVNDSDERVDQLEGGEG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggacaagagagtggggaaacaaacgatgcgcattttgcatacagcggattggcacttt
ggacggtcgctcgaggggcggagtcgcctgcaggagcaggaggcttttgtcgatgagcta
gcggcaattgtgaaggatgaggcaattgatctagtgctgcttgcaggtgatatttatgat
tccgttaatccgccagcggctgcggagcagctgttttatgaagctctttcgcggttatcg
gatgggggcaagcggacggtagccgtcattgcagggaaccacgatcatcctgagcgtgta
tcagcctcggcaccccttgcttctcttagcaacataagacttattggtatgccaactgat
gagcctatgatagtcgatgttgctcgaacaggagagcgagcgatcattgcgggcctaccc
tatccatcggagtcgcgattgcgagaattgttgagtgaggcaaccgatgagactgtgctt
cgaagcgcttattccgagcgagtggggcgtttaatggccaagcttggcgaatcattccga
gcggatacggtaaatttggcgatgagtcatatttatgttttaggtggtttggagacggat
tcagagcggcctatccaaattggcggtgcgtatacggttgatccctcggcgctgcgagtt
ggcgcccagtatgtggctcttggtcatttgcatcggccgcagcgggtggacggtgacgaa
cgcatgcgctacagcggatctcctcttgcctatagtttttctgaggcaggacaagcgaaa
tcggttgtggttatggatgcgaagccagggagcttgattgagcctcgtgaagtgctgctt
agcagcggcaggcctttagttcgatgggtggcaaaaggcgggctaacggaggttcatagc
tggctggaggaagggcgcgatgcccgtgcttggatcgatctagatgtatggatgacggag
tctatgacgctgcagcatattcagcagctgcggcgtcagcatgaaggacttgtacatatc
cgccctgtttatccagagactgcagcatctgctgaagtggatactcgttcgcgtgaacag
cttccagctgaagagctttttcgtcgcttcttctcccgtcaaacaggtggagcagagccg
gatgtggatactgtacagttgtttttggagcttatcgctgaggatgatgagcgtacagcg
gtcaatgattcggatgagcgggttgaccagctggaaggaggcgaaggctaa
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