Paenibacillus baekrokdamisoli: Back11_39640
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Entry
Back11_39640 CDS
T06671
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pbk
Paenibacillus baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbk03009
]
Back11_39640 (rlmCD)
Enzymes [BR:
pbk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Back11_39640 (rlmCD)
Ribosome biogenesis [BR:
pbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Back11_39640 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
MTS
Methyltransf_11
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
BBH22619
UniProt:
A0A3G9JHY5
LinkDB
All DBs
Position
complement(4448133..4449587)
Genome browser
AA seq
484 aa
AA seq
DB search
MSVPVTKNDEVMVDIVGLTHEGEGVGRADGFTLFIQGALPGERVRAKVLKVKKTYGYAKM
MELVVASPDRVEAPCGIFKQCGGCQLQHLSYSGQLGWKRQHVVDNLERIGKLRVAGAVDS
MDGEQNEEQGIVVHPTIGMDEPWRYRNKASVPIGTVVDAPSAGSGSGKERLIGGFYAHGS
HRIIDMEACLIQHSDNDDIIGTVKSIARELGVSAYNEETGRGLLRHVMVRVGFVTGEAMV
VLITNGQRIPQVERWIERIREAFPSVKSIVQNVNTRKTNVIFGDETRVLWGSEVIYDELD
EIRFAISARSFYQVNPLQTVELYRKAVEYAGLTGSETVIDAYCGIGTISLFLARRAGRVY
GVEIVPEAIEDAGRNAALNGIGNASFEAGAAEIVIPRWRKEGIVPDVIVVDPPRKGCDEA
LLETILAMKPERVVYVSCNPSTLARDLRVLEDGGYRTVEVQPVDMFPHTVHIESVCLLIY
KGFE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaccggtaactaaaaatgacgaagtcatggtcgacattgtcggcttgacgcat
gagggtgaaggggtgggccgtgcagacggctttaccctttttattcagggagcacttcct
ggcgagcgcgtacgcgccaaggtgctaaaggtcaagaaaacgtatggctatgcgaagatg
atggagctggtcgtagcgagtcccgaccgagtggaagcaccgtgcgggatcttcaagcag
tgcggcggctgccagctgcagcacttgagttatagcggccagctgggctggaagcggcag
catgtggtggataatttggagcggatcgggaagctgcgagttgctggtgctgtggacagt
atggatggtgaacagaatgaagaacaagggattgtggtccatccgacgattgggatggat
gagccttggcgttatcggaataaggcttcggtgccgattgggacagttgtggatgctcca
tctgcgggttcaggttctggtaaggagcgcctgatcggcggcttctatgcacatggcagt
catcggattattgatatggaagcttgtctcatccagcattccgacaatgatgacatcatc
ggtacggtgaagtctatcgctcgcgagcttggcgtgagtgcctataatgaagagactggt
cgcgggctgctgcgtcatgtgatggttcgagtcggcttcgtcaccggcgaagcgatggtc
gtactcattacgaatggccagcggattccgcaggtggaacgctggattgagcggattcgt
gaggcttttccaagcgtgaagagcattgttcagaacgtgaatacgcgcaagacgaacgtc
atctttggcgatgagacgcgtgtgttgtggggtagtgaagtgatctatgatgagctggat
gagatccgcttcgcgatctcagcgaggtcgttctatcaagtgaaccccttgcagacggtg
gaattgtaccgcaaggcggttgagtatgcaggattaaccgggtcggagacggttattgat
gcgtattgcgggattgggacgatctcgctgttcctcgcgaggcgcgctggtcgtgtgtat
ggcgttgagattgtgccggaggcgattgaggatgcgggtaggaatgcggctttgaacgga
attggtaatgcttcgtttgaagctggtgcggcggagattgttattccacgttggaggaaa
gaaggcattgtgccggatgtgatcgtggtcgatccgccccgcaagggctgcgatgaggcc
ttgctggagacgattctggcgatgaagccggagcgagtggtgtatgtgtcgtgtaatcct
tcgacattggcaagggacttgcgtgtattggaagatggcggttatcggacggttgaggtg
cagccggtggatatgttcccgcatacggtgcatatcgagagcgtttgtctcttgatatat
aagggttttgagtga
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