Paenibacillus baekrokdamisoli: Back11_40840
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Entry
Back11_40840 CDS
T06671
Symbol
lcfA
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk00061
Fatty acid biosynthesis
pbk00071
Fatty acid degradation
pbk01100
Metabolic pathways
pbk01212
Fatty acid metabolism
pbk02024
Quorum sensing
pbk04146
Peroxisome
Module
pbk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Back11_40840 (lcfA)
00071 Fatty acid degradation
Back11_40840 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Back11_40840 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Back11_40840 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbk01004
]
Back11_40840 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbk04147
]
Back11_40840 (lcfA)
Enzymes [BR:
pbk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Back11_40840 (lcfA)
Lipid biosynthesis proteins [BR:
pbk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Back11_40840 (lcfA)
Exosome [BR:
pbk04147
]
Exosomal proteins
Exosomal proteins of breast milk
Back11_40840 (lcfA)
Exosomal proteins of breast cancer cells
Back11_40840 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BBH22739
UniProt:
A0A3G9JI90
LinkDB
All DBs
Position
complement(4583506..4585284)
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AA seq
592 aa
AA seq
DB search
MEQSQERPWYQNYPQEVAPALQVPSLSVADLLLQAAAKYPSHEALYFLGKKTTYRELLAS
AQRMAGGLQTAGIQKGDRVAIMLPNCPQLVIAYFGILLMGGTVVMTNPLYVERELEHQLR
DSGASAIVMLDLFYSRLAKVRGEAPEKGPLPFLKHIIVTSVQDALPFPKNLLYPIKQHRA
GHNPTIPYGRDGIKRFQTFLAKAPAKPAEVMIASEQDVAVLQYTGGTTGLPKGVMLTHRN
LVANSVQMAAWCYRMKDGSERFLAALPLFHVFGLTVLMNQSVMRAGTLILLPRFEAAAVL
QTIRKQKPTFFPGAPTMYIALLNHPDVNNYDLSSINICISGSAPLPLEVQKKFEALTGGR
LIEGYGLTEAAPVTHVNPIWGKRKVGSIGLPVSETEIRIVDLETAELLPAGQVGELLIRG
PQVMAGYWNRAEETAAVLQDGWLHTGDLAAMDSDGFFTIVDRIKDLIIAGGYNIYPREIE
EVLYEHPGVRDASIIGVQDPYRGETVKAFIVLRKGWQVSSTQLDVWCRARLAAYKVPHLY
EFRSELPMSMMGKILRRKLHEEEAAKEKQLNPVEPEEEQADQKQADQEEEQP
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatcgcaggaaaggccttggtatcagaactatccgcaggaggttgcgcctgca
cttcaggtgccaagcctgagcgtagctgaccttttactgcaagcagcggctaaatatcct
agtcatgaggcgctatactttttgggcaaaaaaaccacctatcgcgagctgcttgcgtct
gctcagcggatggctgggggacttcagacagctggaattcagaagggggatcgggtcgcc
attatgctcccgaactgcccacagctggtcattgcttactttggcatcctgcttatgggc
ggaacggtggtcatgaccaatccgttatatgtggaacgcgagctggagcatcagcttcgt
gacagcggtgcgagcgccatcgttatgctcgatttattttactcgcgtctagcaaaggta
aggggagaagcgccagagaaaggccctttacccttcctaaagcatattatcgttacttct
gtgcaggatgcgcttccttttcccaagaacctgctatatcccatcaagcagcacagagct
ggtcacaatcccaccatcccgtacggacgagacggcattaagaggttccagaccttcctg
gccaaagcgccggctaaaccagctgaagtgatgattgcatcagagcaagatgttgcggtg
ctgcagtataccggtgggacgaccggtctgcccaagggtgtcatgctcacccatcggaat
ttagtggctaactcggttcaaatggcggcatggtgctacaggatgaaggatggctccgag
cggtttctagctgctctccccctgtttcacgtattcgggcttacggtgctcatgaaccaa
tcggttatgcgagcggggacgttgattttacttccgcggtttgaggctgcagctgttttg
caaactattcggaagcaaaagccgactttttttcccggtgctccaacgatgtatattgcg
cttctgaatcatcccgatgtgaataactatgatttatcatccataaatatttgtattagc
ggctctgctccacttccgttagaggtgcaaaaaaagttcgaagctctaacaggcggacgg
cttattgaagggtatggtttgaccgaagctgcgccagtaacacatgtaaatccgatatgg
ggcaaacgtaaagtcggttcgattggcctgcccgtgtctgaaacggaaatccgcattgtc
gatctagaaacagccgagctgctgccagcaggtcaagtgggggaactgcttatccggggt
cctcaggtgatggcgggctactggaaccgggccgaggaaacagctgcggtgcttcaggac
ggctggcttcataccggcgatctggctgctatggattcggatggattcttcacgattgtt
gaccggataaaggatctcattattgctggtggatacaatatctatccgcgggagattgag
gaggtgctgtatgagcatccaggcgttcgggatgcgtctattatcggcgttcaggatcct
taccgcggggaaacggtaaaagcgtttatcgtgctccgcaagggctggcaagtatcctcc
acgcagctcgatgtctggtgccgagctcgtttagccgcttataaagtgccccatctgtac
gaatttcgcagtgagctgccgatgtccatgatgggaaagatactacgccgcaagcttcat
gaggaagaggcagccaaggagaaacagttgaaccccgtggagccagaagaagagcaagca
gatcaaaagcaagcagaccaagaggaggagcagccatga
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