Paenibacillus baekrokdamisoli: Back11_45120
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Entry
Back11_45120 CDS
T06671
Name
(GenBank) hypothetical protein
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Back11_45120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbk03021
]
Back11_45120
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_45120
Transcription machinery [BR:
pbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Back11_45120
DNA repair and recombination proteins [BR:
pbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Back11_45120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
BUD22
Motif
Other DBs
NCBI-ProteinID:
BBH23167
UniProt:
A0A3G9IW78
LinkDB
All DBs
Position
complement(5076892..5077464)
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AA seq
190 aa
AA seq
DB search
MSSEITLKIDPERIKEMPMVDLAFELLKAVNTPFYYRDLMAEIAKIRGLSQDGINQVIAQ
VYTEINIDGRFACVGSNMWGLKRWYPVEKNEDPVGNAKRTRIINDEDDDEESYPDEEEET
YAADEDDFDTYDEDQELFDEAEEEAEVDEEVLIDDDELEGEAIEGEAEVDGDDEDSSDDF
DDDDEDEDTK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgagattactttaaaaatcgaccctgagcgcattaaggaaatgccgatggtt
gatctggcgtttgaattgctgaaagcggtcaatacaccgttctactatcgtgacttaatg
gctgaaattgcaaaaatccggggcttgtcccaagatggaatcaaccaagtgattgcgcaa
gtatatacagaaattaatatcgacggacggttcgcttgtgttggcagtaacatgtgggga
ctgaagcgctggtatccagttgagaagaacgaggatccggtgggtaatgccaagcgtacg
cgtatcatcaatgatgaagatgatgatgaggaatcgtatccggacgaggaagaagaaacc
tacgcagccgatgaagatgacttcgatacatacgatgaggatcaagagctcttcgatgaa
gcggaggaagaagcagaggttgacgaggaagtgttaattgacgacgatgaacttgaggga
gaagcgattgaaggcgaagctgaggttgatggcgacgacgaagattcctccgatgatttt
gatgacgatgatgaagatgaagacactaaataa
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