Paenibacillus baekrokdamisoli: Back11_49180
Help
Entry
Back11_49180 CDS
T06671
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Back11_49180 (dbpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbk03019
]
Back11_49180 (dbpA)
03009 Ribosome biogenesis [BR:
pbk03009
]
Back11_49180 (dbpA)
Enzymes [BR:
pbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Back11_49180 (dbpA)
Messenger RNA biogenesis [BR:
pbk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Back11_49180 (dbpA)
Ribosome biogenesis [BR:
pbk03009
]
Prokaryotic type
rRNA helicases
Back11_49180 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
AAA_30
Flavi_DEAD
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
BBH23573
UniProt:
A0A3G9JF23
LinkDB
All DBs
Position
5542362..5543810
Genome browser
AA seq
482 aa
AA seq
DB search
MSQTSFSTYKLSEEIVRALDSLGYEQPTDVQAKVIPVALEKKDLVVKSHTGSGKTAAFGI
PICEMVDWEENSPQALILSPTRELADQVKEDITNIGRLKRIKATALYGKQPFAKQKLELH
QKTHVVVGTPGRVIDHITKGTLDIEKVRYLVIDEADEMLNKGFIEQVGAIIDELPKDRVT
LLFSATLPKDVEGLCHRYMSSPVYIEMVTSEEATAQIEHSLIIVKEENKPNLLKDITIVQ
NPDSCIIFCRTQEQVDNVYKQLNQMNYRCNKIHGGMEQDDRFSVMNDFRRGKFRYLVATD
VAARGIDIENITHVINYDLPVEKESYVHRAGRTGRAGKSGKAISFVKPSEERLLADIEGY
IGMEIHRSDAPSREEVSKRMAAFEKKLRAEPTIKKHKSDQLNQEILKLYFNGGKKKKLRA
VDFVGTIAKIEGMTAEDIGIITIQDNVTYVDILNGKGQLVIQAMKTTTIKGKQLKVHKAL
EK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacaagctttagtacctataaattaagtgaagagatcgtacgtgcgctggat
agcctaggctatgagcagccgacagacgtgcaagctaaggtcattccggtcgcactcgag
aagaaggatcttgttgtaaagtcacacacgggcagcggcaagacggccgctttcggtatt
ccgatctgcgaaatggtcgattgggaagagaacagtccacaagcgctcattctgtcacca
acgcgtgagctggctgatcaagtcaaagaggatattacgaatattggcaggctgaagcgg
attaaggcgacagctctgtatggcaagcagccttttgccaagcagaaactagaactgcac
cagaaaactcacgtggttgtaggcacgccagggcgtgtgattgaccatattacaaaaggt
acactcgatatcgaaaaggtgagatatctggttattgatgaagctgatgagatgctgaat
aaaggatttattgagcaggtaggcgctattattgatgagcttccgaaggaccgggtaacg
ctgctattctctgctaccttgcccaaggatgttgaaggcttatgccatcgctatatgagc
agccctgtgtatatcgagatggttacctcggaggaagcgacagcgcagattgaacattct
cttatcattgtcaaagaagagaacaaaccgaatctgcttaaggatataacgatcgtccag
aatccggacagctgcatcatcttctgccgcactcaggagcaggttgataacgtctataag
cagttgaatcagatgaactataggtgtaacaaaattcatggcggtatggaacaggatgat
cggttcagcgtcatgaatgattttcgaaggggtaaattccggtatctcgtggcgacggat
gtagctgctaggggcatcgatatcgagaatattacccatgtcatcaactatgacctgcct
gttgagaaggaaagctacgtacaccgagcggggagaacgggacgagccggtaagtctggt
aaagcgattagcttcgttaagccaagtgaagaacggctgttagcggatattgagggatat
ataggaatggaaattcacagaagtgatgctccttccagggaagaagtcagcaagcgaatg
gctgcatttgaaaagaaactgagagcggaacccacaattaagaagcataagagtgatcaa
ctgaatcaggaaattctgaagctgtactttaacggcggaaagaaaaagaagctcagagcg
gtggattttgtcggaacgattgctaagattgagggtatgactgctgaggatattgggatt
attacgattcaagataacgttacgtatgtggatattttgaatggaaaaggccagctcgtc
attcaagcgatgaagacaacgacgattaaaggcaagcaattgaaggtgcataaggcgctt
gagaaatag
DBGET
integrated database retrieval system
