Paenibacillus baekrokdamisoli: Back11_50540
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Entry
Back11_50540 CDS
T06671
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03022
Basal transcription factors
pbk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Back11_50540
09124 Replication and repair
03420 Nucleotide excision repair
Back11_50540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbk03021
]
Back11_50540
03036 Chromosome and associated proteins [BR:
pbk03036
]
Back11_50540
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_50540
Enzymes [BR:
pbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Back11_50540
Transcription machinery [BR:
pbk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Back11_50540
Chromosome and associated proteins [BR:
pbk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Back11_50540
DNA repair and recombination proteins [BR:
pbk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Back11_50540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PI3K_P85_iSH2
Motif
Other DBs
NCBI-ProteinID:
BBH23709
UniProt:
A0A3G9JKZ5
LinkDB
All DBs
Position
5699957..5702329
Genome browser
AA seq
790 aa
AA seq
DB search
MPNTIRLSVRSLVEYVCSSGSIESGFRTTSSMTEGTKVHQAIQKQYGEQDQKEVYVSVEI
VIDDLLFIVDGRCDGLLAHETILTVDEIKSTARELAAITESSYPVHWAQAKMYAYIIAKD
QGLDQMKVQLTYVQVVTGEQKRFVEVMPFVELEQFMLSMLAAYSPYAQLITHHARLRDES
IKQLAFPFDQYREGQRKLAGAVYKTIADSGKLFAKAPTGIGKTISTIFPSIKAMGEGLLQ
RILYLTAKTITRTAAEEAYALLESKGLHLHTVTLTAKEKVCFKEEVRCSKEHCEYADGYY
DRINEALLDLLSQETLMTRTVIEAYAHKHRVCPFEFALDAAYAADAMICDYNYVFDPRVS
LKRLFDDQKRQTALLIDESHNLVDRAREMYSSELHKADFLAVQREYKTTNPALYQAAKAV
NDSYIALRKQIGDRYTQVVKEPPESLVVLLETFVSLAEKELLVPGSGPGQGNALLLDLFY
AAQSFIRIAKLYDERFVTYTECTKSDVRMKLFCLDPSHLLRQMSKGYRSVIFFSATLSPL
NYYMDMLGGGSESDFSVTIPSPFSSTQLDVFIGPLSTRYQDRERTKDPIVRLISEMTKER
PGNYLLFFPSYEYMNDAYERYAAAAEDGQANTIIQGTSMTEEDRENFLAAFAVEPISAMA
RLGPNDDGKKKAFVGFAVMGGIFSEGIDLVGDRLTGVVVVGVGLPQIGLERNIIREYFDS
VGKNGFDYAFLYPGMNKVLQAGGRLIRSETDTGSLLLIDDRYLQPQYNRLLPQEWKNYTI
LNGPKPSSFS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatacgatacgtctgtcggtacgatcgctcgttgaatatgtatgtagcagtggc
agcatcgaatctggttttcggacaaccagctccatgacggaggggacgaaggtccatcaa
gcgattcagaagcagtacggcgagcaggaccagaaggaagtatatgtctctgtggagatc
gtgattgacgatcttctattcatcgttgatggacgttgtgatgggcttctggcgcatgaa
acgatcttaacagttgacgaaattaagtctactgcaagggaactcgcggctattacggag
agctcgtatcccgttcattgggcgcaagccaagatgtatgcttacattatcgctaaggat
caagggctcgatcagatgaaggtgcagctaacctatgtgcaggtggttacgggggagcag
aagcgtttcgtcgaagtgatgccattcgtggagctggagcaattcatgttgagtatgctg
gcggcctattctccctacgcgcagttaattacccatcatgcaaggctaagagacgagagt
atcaagcagctcgcttttccgtttgatcaataccgagaaggccagcggaagctagctgga
gctgtgtataaaaccattgccgacagcggtaaactttttgcaaaagcacctactggcata
gggaaaacgatctcgacgatcttcccatctattaaggccatgggggagggtttgcttcaa
cgcatcctttatttgactgcgaagacgattacacggacggctgctgaagaggcctatgcc
ctgctggaatctaaagggctgcatctgcatactgtgacactaacggccaaggaaaaagtt
tgcttcaaagaggaagtgcggtgctccaaagaacattgcgaatatgcagatggctattat
gaccgaatcaatgaagcgctgctggatctgctgtcacaggagacgctgatgactcggact
gttatcgaagcttatgcccataagcatcgggtatgtccgttcgaatttgctctggatgcc
gcgtatgccgctgatgcgatgatatgcgactacaactatgtgtttgacccgcgcgtcagt
ttgaagcggctgttcgatgatcagaagcggcaaaccgctttattgatagatgagtcgcat
aatctggtggatcgtgctcgtgagatgtattccagtgagctgcataaggcggattttctt
gcggttcaaagagaatataaaacaacgaatccggcactatatcaagcggccaaagcagtg
aacgatagctatatcgcgcttcgcaagcaaattggagatcgttatacacaggtggtcaaa
gagccgccggagtcactagtagtactgctcgagacttttgtaagcctggctgagaaggag
cttctagtgccgggctctgggccaggtcagggcaatgccctgctgttggatctgttttat
gctgctcagagcttcatccgcattgcgaagctgtacgatgagcgcttcgtcacgtacacg
gaatgcacgaaaagtgatgttcgcatgaagctgttctgtctagacccctcgcatctcttg
cggcagatgagtaagggctatcgatcggtcatttttttctccgctacgttatcaccgctg
aattattatatggatatgcttggtggcggctcggagtcagatttctccgtgacgatacca
tcgccattctccagtacacagctggatgtgttcatcgggccgctgtcgacccggtatcag
gatcgggaacggacgaaagatccgatcgttcggctcatcagtgaaatgacgaaggagagg
ccgggtaattatttgctgttcttcccgtcttatgaatatatgaatgatgcttatgagcga
tatgcagctgctgctgaggatggacaggcgaatacgattattcaagggacgagcatgacg
gaggaagacagagagaacttcttagctgctttcgcagtggaaccgataagtgctatggct
agattgggtcctaatgatgatggcaaaaagaaagccttcgtcgggtttgccgtcatgggc
ggcatcttctcggaaggcatcgatttggtcggtgatcgtctgacaggcgttgttgtcgta
ggtgttgggcttccgcaaattggtctcgaacgtaacatcatccgtgaatattttgatagc
gtgggtaagaatggcttcgattatgctttcctctatcccggcatgaataaggtactgcag
gcaggtggaaggctgattcgttccgaaaccgatacgggcagcctgctgttgatcgatgat
cgttatttgcagccgcaatataatcgcctgttacctcaggagtggaagaattacacgatt
ctgaacggaccgaagccgagttccttttcctag
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