Paenibacillus baekrokdamisoli: Back11_53040
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Entry
Back11_53040 CDS
T06671
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03420
Nucleotide excision repair
pbk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Back11_53040
03430 Mismatch repair
Back11_53040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_53040
Enzymes [BR:
pbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Back11_53040
DNA repair and recombination proteins [BR:
pbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Back11_53040
MMR (mismatch excision repair)
Other MMR factors
Back11_53040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
DUF2067
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBH23959
UniProt:
A0A3G9JLP9
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All DBs
Position
6003666..6006011
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AA seq
781 aa
AA seq
DB search
MLNEFSIDQAVKKLNPPQQAAVQATEGPLLIMAGAGSGKTRVLTHRIAYLIEKRRVAPWS
ILAITFTNKAAREMQERVGALVGPSGRDIWVSTFHSMCVRILRKDINRIGFTNSFSILDS
SDQLSVIRNCMKDQNIDVKKFEPKSVQAAIGAAKNELISPEQFERKIGDYFDQIVAQVYT
SYQKRLKSNNSLDFDDLIMKTIQLFNDEPDVLKFYQNKFRYIHVDEYQDTNRAQYMLCNM
LADNHHNICVVGDSDQSIYRWRGADITNILNFESDYPEAKAILLEQNYRSTANILNAANA
VIKQNSGRKDKKLWTDQGEGETITIHQADSEHEEGYFVTGKIREHVSKGRKFSDHAILYR
ANAQSRVIEETLIKSDIPYQIVGGVKFYDRKEIKDLLAYLRLLSNPDDDICFERIVNVPK
RGIGDTTVAKLSGEAGLRGISIFALLEQLDWLELSGRARTALREFHDMIDNLTRMVEYLS
VTELTEKILELSGYRDELKRENTLESKARLENIDEFLSVTQEFEKRNEDKTLLSFLTDLA
LIADIDSMGKDEPEEGIKDAVVLMTMHSAKGLEFPVVFIIGMEEGLFPHSRTLMDNDELE
EERRLAYVGITRAEKQLYMTCARSRTLYGRTSMNMPSRFLKEVPDELKTEATREGFGYRG
GSGTAAGNRPGFSGQSPIGAGRPAIGFGAKGAAGPITGGRSSSGVQVSTPLDAAKAAGAA
AGGGEASKDFTAGDKVSHAKWGIGTVVSVRGANNDKELQIAFPAPVGLKKLLASFAPITK
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgaatttagtatcgatcaagcagtaaaaaagcttaatcctccccagcaggca
gcggttcaagcgacggaaggacctttgcttataatggcgggagcgggcagtggtaagaca
cgcgtgctcacacaccgcattgcatatctaattgagaaaagacgagtggcgccatggagc
atactggcgattaccttcacgaataaagctgcacgtgagatgcaggagcgggttggcgca
ttagtaggcccatctggacgagatatatgggtttctacttttcactccatgtgcgtccgt
attttgcgtaaggatattaatcgaattggatttacgaatagcttctctattcttgattcc
tctgatcagttgtctgttattcgcaattgtatgaaggatcagaatattgatgtgaagaag
tttgagcccaagagtgtgcaggcggccattggcgcagcgaagaatgaattgatctcaccc
gagcagttcgagcgcaaaatcggtgattattttgatcaaatcgtagcccaagtctatacc
tcttatcagaaacggcttaagagcaataattcacttgattttgacgatttgattatgaaa
accattcaattatttaacgatgaaccggatgtgctgaagttctatcagaataaattccgc
tatattcatgtagatgagtatcaggatacgaaccgggcgcagtatatgctctgtaacatg
ctggcggacaatcaccacaatatttgtgttgttggtgacagcgatcaatcgatctatcgc
tggcgtggtgcggatattacgaatatcttgaactttgagagtgattatccggaagctaag
gctatactgctagagcagaactatcggtcgacggcgaatattctgaatgcggcgaacgca
gtcatcaagcaaaattcgggtcggaaggataagaagctgtggacggatcaaggtgaaggc
gagacgataacgatccatcaggcggattccgagcatgaggaaggttattttgtaacgggt
aaaattcgtgagcatgtgtctaagggccgcaagttcagcgatcatgcgattctttatcgc
gcgaatgcgcaatcaagggtaatagaggaaacgctcattaaatctgatattccgtatcaa
attgttggcggcgtcaaattctatgatcgaaaagagattaaagatttacttgcctatttg
cgtctcctatccaatccagacgatgatatatgtttcgaacgcattgttaatgttcctaaa
cggggaataggtgacacgaccgttgccaagctatcaggagaagcggggctgcgcggcatt
tcaatctttgcactgcttgagcagcttgattggctggaactgtctggccgcgctcgaact
gcactcagggaattccacgatatgatcgacaatttaacgcggatggtcgaatatttatct
gtaacggagcttacggagaaaattcttgagctgagcggttatcgggatgagctgaagcgt
gagaatacgctggaatcgaaggctcggcttgagaatattgatgagtttttgtccgtaacg
caagaatttgagaagcgtaatgaagataaaacacttcttagctttctaacggatcttgct
cttattgcggatattgattctatgggtaaggatgagcctgaagaaggcattaaggatgcg
gttgtgctcatgaccatgcacagcgccaaaggtctcgaattcccagtcgtctttatcatc
ggaatggaggagggtctattccctcacagccggacgctgatggataacgatgagctagag
gaagaacgtcgtctggcctacgttggcattacaagagcagaaaagcagctctatatgacc
tgtgcaaggtcacgtaccttatatggtcgcaccagtatgaacatgccatcgcggtttctt
aaggaagtaccggatgagcttaagacagaagcgactcgggaaggctttggatatcgcgga
ggatcaggaacagccgctggcaatcgaccaggattcagcggacagtcgcctatcggcgca
ggcagaccagctattggctttggagctaagggggctgcaggaccgataactggaggtagg
agcagcagtggagtccaggttagcacaccactggatgccgccaaagcagctggagctgca
gcgggtggaggagaagctagcaaagactttactgcaggtgacaaagtttcgcatgcgaag
tgggggataggcaccgtagtttccgtacgcggtgctaataatgataaggaactgcaaatt
gcgtttccagctccagtaggacttaaaaagctgcttgccagctttgcaccaataacgaaa
gtataa
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