Paenibacillus baekrokdamisoli: Back11_53690
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Entry
Back11_53690 CDS
T06671
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Back11_53690 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbk03021
]
Back11_53690 (rpoA)
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_53690 (rpoA)
Enzymes [BR:
pbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Back11_53690 (rpoA)
Transcription machinery [BR:
pbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Back11_53690 (rpoA)
DNA repair and recombination proteins [BR:
pbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Back11_53690 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BBH24024
UniProt:
A0A3G9JMC8
LinkDB
All DBs
Position
6064722..6065666
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELNEDGTYGRFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVVEDVTEIILNLKGLSLKIHSDEEKVLEIDAEGDGNVTAGDIRADSDVEI
LSPDLHIATLASGARLHMRVFANRGRGYVQADRNKRDDQPIGVIPVDSIYTPITRVNYSV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLDLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRMEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaaatcgaaaagccgaaaatcgaaaccgttgagctgaacgaagatggcacatac
ggacgtttcgtagtcgaaccgctagaacgcggatacggcacgacgctggggaactcgctt
cgccgaatcctgttgtcgtctttgccaggtgcagcagttacctcggttcaaatcgacggt
gtgcttcatgagttctcaacggttccaggagtggtggaagacgttactgaaatcatcctg
aacctcaaaggcctctcgctgaaaatccattccgacgaagagaaggtattggagatcgac
gcggaaggtgatggaaacgttacggctggcgatattcgcgcagacagcgatgtcgagatt
ttaagccctgatcttcatatcgcgacgctggcctccggtgcacgtctccacatgcgggta
tttgctaaccgtggacgcggttatgttcaagcggatcgtaataagcgggatgaccaacca
attggtgttattcctgtggattcgatttacacgcccatcactcgcgtcaactatagtgtt
gagaatactcgtgtcggtcaagtaaccaactacgacaagctgactctggaagtatggacc
gatggaagtataaggccggaagaggcagtaagtctcggagccaaaattttgactgagcat
ttagatctgttcgttggtttgactgacgaagcgaaagatgccgaaattatggttgaaaaa
gaagaagacaagaaagagaaagtactcgagatgactatcgaggaattggatctttccgta
cgttcgtacaattgtctcaagcgtgcaggcattaataccgttcaagagctgattacgaaa
tccgaagaagacatgatgaaagtccgtaatcttggacgcaagtctttagaagaagttcaa
gaaaagctcgaagaacttggtcttggcctccgcatggaagaatag
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