KEGG   Paenibacillus baekrokdamisoli: Back11_58620
Entry
Back11_58620      CDS       T06671                                 
Name
(GenBank) DNA polymerase domain-containing protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
pbk  Paenibacillus baekrokdamisoli
Pathway
pbk03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pbk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Back11_58620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbk03400]
    Back11_58620
Enzymes [BR:pbk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Back11_58620
DNA repair and recombination proteins [BR:pbk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Back11_58620
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: BBH24517
UniProt: A0A3G9IZZ0
LinkDB
Position
complement(6600254..6601165)
AA seq 303 aa
MNRTMKGKVMIEGQELTISNPTKLLFPEMGITKAMYLQRLTALSPWLLKHCQDRYLTTIR
YPDGVTGKSFYQKNCPAPTPAFVQTDEREGIHYVKLQSLPVLLWLGNLACLEFHASFDRI
SDRDHPTEWVLDIDPSLEEEPRIMEAASLVGELLESLGIASTPKTSGATGIQIIVPLIPD
LTFDELRRIGEFVGTFLSNKYPRLFTIERLKKLRGDLIYIDYLQHYQGKTIIAPYSPRAR
NRATVSTPLYWEEVRRNVAITDFNLLNIEARLAQEGDLLDLVAPQPLRHILAFISGSKKG
QSE
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaaccgtacaatgaaaggcaaagtaatgattgagggacaggaactaacgatcagtaac
ccaaccaagctcctatttcccgagatgggtattacgaaggcgatgtacctgcagcgactt
accgctctttcgccttggctgcttaagcattgtcaggatcgttatttgacgaccattcgt
tatcctgacggtgtaaccggcaaatccttttatcaaaaaaactgccccgcacctacgcct
gcattcgtgcaaaccgatgaacgtgaggggattcattacgtaaagctgcagtcgctgcct
gtactcctctggctcggtaacttggcatgtctggaatttcatgcttcctttgatcgcatc
agtgatcgagaccaccctactgagtgggtgcttgatatcgatccttcgttagaggaggag
ccgcgtatcatggaagcagcatccttggtgggtgagcttctcgaatcgcttggaatcgca
tctactcccaagacatcaggggcgacaggtattcaaatcattgtcccccttataccagac
ctcaccttcgatgagctccgtcggatcggcgaattcgtcggtaccttcttatcgaacaag
tacccccgtctgtttacaatcgaacgcttgaagaagctgcgcggggatcttatttatatt
gactatcttcagcattatcagggcaaaacgattattgcaccctattctccacgggcccgc
aatcgagcaacggtgtctacgccgctttactgggaagaggttcgacgcaacgtcgccatt
acagactttaatctccttaatattgaagctcgactcgcccaagagggggatctgttagat
cttgtagctccccagccgttgcggcacatactagccttcatcagcggctcaaaaaaaggg
caatctgaatga

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