Paenibacillus baekrokdamisoli: Back11_58640
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Entry
Back11_58640 CDS
T06671
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
pbk
Paenibacillus baekrokdamisoli
Pathway
pbk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Back11_58640 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbk03400
]
Back11_58640 (ku)
DNA repair and recombination proteins [BR:
pbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Back11_58640 (ku)
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BBH24519
UniProt:
A0A3G9JNA1
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All DBs
Position
complement(6602259..6603254)
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AA seq
331 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFSATEDKDISMKLIHRECGSNISYIRKCPTCEVEVDWDAI
VKGYEYEKGHYVLFEKDELEQLSDDVTKTIKILDFVALEEIDPIYFQKTYYLSPDQAGGN
AYNLLLEAMRQSGRIGIAKVSIRSKSSLAAIRIIGDCLAMETIFFPDEIRSVDQVPGLPE
HVDVNEKELMMARMLIEQLSTPFEPAKYNDDYRSRLMDMIQHKIAGEEVRVAPEQQRTNV
LDLMAALQASLEAVKLPPDAKGSLDTGATHAAHTGSGTTEADTVRTASSEAAAQDGTQAG
VGASDTSAAKVPKPRKPRGSSGSAKQGGALG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtttggaaaggggccatcagctttggtctcgtgcatgtaccagtaaaaatg
ttctcggctacggaggataaggatatctccatgaagctgattcaccgagaatgcggaagc
aatatctcttatattcgcaaatgtccaacctgtgaggttgaagtggactgggatgcaatt
gtaaaaggatatgagtatgaaaagggtcactatgtcttgttcgagaaggatgagctcgag
cagctgtctgatgatgtgacaaaaacgattaaaattttggattttgtagcgttagaagaa
attgatccgatttattttcagaaaacctactacctctcacctgatcaagcaggtggcaat
gcctataatttactgcttgaagcgatgagacaatccgggcgaatcggtattgctaaagta
tccattcgttcaaaaagctcactagccgccattcgcattatcggggattgcttggctatg
gagaccattttcttcccggatgagatccgttcggtagatcaggtccctggacttccagag
catgttgatgtcaatgagaaggagctgatgatggctcgtatgctcatcgaacagctctct
acaccttttgagcctgccaaatacaatgatgattaccgcagccgtctgatggatatgatt
caacataaaattgccggcgaagaggtgcgagtggcgccggagcagcagcgcacgaatgtg
cttgacctcatggctgcactgcaggcaagcctcgaggccgtgaagctcccacctgatgca
aagggcagtctagatactggcgcaacccatgcagctcatacgggcagcggtacaacagaa
gctgatacagtgcggacagcttcgtctgaagctgctgctcaggacggtactcaggcagga
gtaggagcaagtgacacatcagctgcgaaggtaccaaaacctcgcaagccgaggggcagc
tccggatcagcgaagcagggcggtgccttaggatga
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