Paenibacillus baekrokdamisoli: Back11_62810
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Entry
Back11_62810 CDS
T06671
Symbol
yjbO
Name
(GenBank) putative RNA pseudouridine synthase YjbO
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pbk
Paenibacillus baekrokdamisoli
Brite
KEGG Orthology (KO) [BR:
pbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbk03009
]
Back11_62810 (yjbO)
Enzymes [BR:
pbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Back11_62810 (yjbO)
Ribosome biogenesis [BR:
pbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Back11_62810 (yjbO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
CitF
Motif
Other DBs
NCBI-ProteinID:
BBH24936
UniProt:
A0A3G9J2F2
LinkDB
All DBs
Position
7079550..7080449
Genome browser
AA seq
299 aa
AA seq
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MRLGVSRKLLSRVKTTEQGITVNGERVYTNDRLKEGDILEVRMEQEQSEDILPQPLPLDI
VYEDRDLLIVNKPPGIVVHPTHGHYTGTIANAAVYHWREQGERVRFRPVHRLDEDTSGLV
AIAKNPYIHQQLSEQLQAGEVEKRYWAYVYGAPKIVNGTVDEPIDRDTDNPHVRVVRPDG
YPSVTHYGTEMIFGEGLAAKVSLKLETGRTHQIRVHMKHIGCPLIGDKLYGFAGEEETDE
GIKPVTKAGGSATLEAAVQRQALHAAILAFTHPITRERMRFEAALPQDLQDLENELRKL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttggcgtttcccgcaagctgctttcaagagtaaaaacgactgagcaggggatt
acagtcaacggagagcgtgtttatacgaatgatcgactcaaggaaggcgatattctagag
gtgcggatggagcaagagcagtcggaggatatcctgccacagccactgccgttagatatc
gtttatgaggatcgtgatttactcatcgtgaacaaaccgccaggtattgtcgttcaccct
actcatggacattatacgggtacaattgcgaatgccgccgtttatcattggcgagaacag
ggtgaacgggttcgttttcgccctgtccatcgactggatgaggatacctcgggacttgtg
gcgattgccaagaatccctatattcatcagcaattgtccgagcagctgcaggcgggcgag
gtggagaaacgatattgggcttatgtatatggggcacctaagattgtgaatggaacagta
gatgagcctatcgatcgagataccgacaacccgcatgtccgtgttgtaagacctgatggc
tatccatccgtcacccactatggaacggaaatgatttttggagaaggcttggcagctaag
gtgagtttgaagctggaaacgggaagaactcatcaaattcgcgttcatatgaagcatatc
ggctgtcctctcattggggataagctatatggttttgctggtgaagaggagacagatgaa
ggcatcaaaccagttactaaggccggtggttccgctactctggaagcagctgtccagaga
caagctctgcatgcggcgattctggcattcacccatccgatcacacgagaaagaatgaga
ttcgaagcggctcttccccaagatcttcaagatctcgaaaatgagcttcgtaaattatag
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