Paracoccidioides lutzii Pb01: PAAG_00366
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Entry
PAAG_00366 CDS
T02230
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pbl
Paracoccidioides lutzii Pb01
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbl03041
]
PAAG_00366
Enzymes [BR:
pbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PAAG_00366
Spliceosome [BR:
pbl03041
]
Complex C
Other components
Complex C specific factors
PAAG_00366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
Cas3-like_C_2
AAA_30
AAA_19
cobW
T2SSE
Herpes_ori_bp
AAA_23
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
9100914
NCBI-ProteinID:
XP_002797827
UniProt:
C1GPC1
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MASDFDLTASFIPSLYKPAALLPIARHREALLYLIETYPVTIVVGQTGSGKTTQLPQFLD
QAGWCSDGKIIAITQPRRVAATTVAARVAEEMRCKVGEDVGYSIRFEDVTSSSTRIKFLT
DGLLLREALVDPLLSRYSVIMVDEAHERSISTDILLGVLKKIRKQRPELRIVVSSATLQA
EEFLRFFAGDEFNPESENELGGSIGRIITIEGRMYSVDCLFLETPAEDYVERAVKTVFDI
HTREPDGDILMFLTGREEIDAVIQQISERANSLHAKAQDLLPLPLYAGLTTEQQLYVFEP
APEKTRKVIVATNIAEASITVDGIVYVVDCGFVKLRAYNPNTGIETLTPTPISKASATQR
AGRAGRTRMGKCFRLYTEQSYQSLPEVTVPEIQRSNLAPVILQLKALGIDNIARFDFISS
PPSELVVRGLELLYSLGALDDYAKLTRPLGIQMAELAVEPMLAKALLGASSFGCLSEILS
IAAMTSLQGSVWFEKNGDKKEAESSRRNFAVEEGDHLTYLNVYQAFVTKGKKDAKWCRNN
RLNYRSMVKAVSIRAQLKRYLERFGVKVDESLSSSPATPEQIQRCLTTGYFAHAAKMQPD
GSFKPISGDITLHAHPSSLLFNRKADWVIFHEILQTGSKTFIRDLTKIEKSWLLEYAPDY
YRVKE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgattttgatctcacagcttcgttcattccgtcgctgtataaacctgcggcg
ttactaccaattgcccgtcaccgggaagctctcctctaccttatagaaacatatcccgtg
actattgttgtgggccagacagggagcgggaagactacccaattgccccaattcctcgat
caagcaggatggtgttcggatgggaaaataatcgccatcactcagcctcggcgggtggct
gcgaccacagtcgcagctagagtggccgaggagatgcgatgtaaagttggtgaagatgta
ggctattcgatacggttcgaggatgtgacctcgtcgtcaacacggattaagttcttgacg
gacggtttattgttgcgagaagccctggtggacccgctgctgtctcgctattcagttatt
atggttgatgaagctcatgaacgttctataagcactgatatcctgcttggcgttctgaag
aaaatcagaaaacaacgccccgaactacgaattgttgtcagcagtgccacactgcaggca
gaagaattcctgcgtttctttgctggagacgaattcaatcctgaaagtgaaaatgagcta
ggcggctctattggcagaattatcaccatcgaagggcggatgtattccgtcgactgcctc
tttttggaaactcccgcagaagattacgtggagagagctgtcaaaaccgtattcgacatt
cataccagggaaccggacggggacatcttgatgttcctaacaggaagggaggaaatcgac
gccgtgatccagcaaatctcagaacgcgcaaattcattgcatgccaaagctcaagatctt
cttccattacccctttatgccgggctcacaaccgaacaacagctctacgtcttcgaacct
gcacccgagaaaacccggaaagtcatcgtagccaccaatatcgctgaagcctccatcacc
gttgatggaattgtgtatgtagtcgattgtggttttgtgaaactccgcgcttacaatcca
aataccggtatagagacgttaacgccaacccccatttccaaggcatccgcaacacaacga
gcggggcgtgcaggacggaccaggatggggaaatgtttccgcctctatactgagcagtca
tatcaatcgctgccagaggtaacggttccggaaatccaacggtctaatctcgcacccgtg
attcttcagctcaaggccctgggtatcgacaacatcgcccgctttgacttcatttcctct
cctccgtctgaacttgttgttcgtggccttgaattactgtactctctcggtgctttagat
gattatgcaaaactcacacgcccactcgggattcaaatggctgagcttgcagtggaaccg
atgctggcaaaggctctccttggggcctcctctttcggttgtctgagtgagattctgtca
attgctgcaatgacaagtctgcaaggctcagtctggttcgagaaaaacggggacaagaaa
gaggcagagagttcgcggcgaaactttgctgtggaggagggggaccatttaacgtacttg
aacgtgtatcaagcttttgttaccaaggggaagaaagatgccaagtggtgtcgaaacaat
cgtctcaactaccgatctatggtcaaagccgtcagcatccgtgcacagctcaagcgatac
ctagaacgctttggggttaaagtggatgaatccctctcatccagtcctgcaacaccagaa
caaatccagcgctgcctcacaaccggatattttgcacatgcggcgaagatgcagccagat
ggcagctttaaacctatcagtggcgacataacgctacacgcgcacccgagctctttgctg
tttaaccgcaaagcggattgggttatctttcatgaaattctacagacaggcagtaagaca
tttattcgagatctcacgaaaatcgagaagtcgtggcttcttgaatatgccccggattac
taccgagtcaaagagtaa
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