Paracoccidioides lutzii Pb01: PAAG_01630
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Entry
PAAG_01630 CDS
T02230
Name
(RefSeq) small nuclear ribonucleoprotein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03018
RNA degradation
pbl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAAG_01630
09123 Folding, sorting and degradation
03018 RNA degradation
PAAG_01630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbl03019
]
PAAG_01630
03041 Spliceosome [BR:
pbl03041
]
PAAG_01630
Messenger RNA biogenesis [BR:
pbl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PAAG_01630
mRNA degradation factors
5'-3' decay
Lsm complex
PAAG_01630
Spliceosome [BR:
pbl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PAAG_01630
Complex C
U2 snRNP components
PAAG_01630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
Motif
Other DBs
NCBI-GeneID:
9099919
NCBI-ProteinID:
XP_015701307
UniProt:
C1GSY5
LinkDB
All DBs
Position
Unknown
AA seq
142 aa
AA seq
DB search
MLFFSFFKTLTNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDQYPHLSSVKNI
FVRGSVVRYVVLPQAEVDRGLLEDATRRVSSRAVSFLSLVFNPPGFKGSLHTRIICECID
PTGLPPRLKQQIKQTRLDKSIK
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcttcagttttttcaagacgctcacgaatcacacggtcaccattgagcttaag
aacgatatccgtatccgtggcactctcaaaagcgtcgaccaataccttaatataaagcta
gatgatattgaggttctagacctagaccaatatccgcatctctctagcgtgaagaatata
tttgtcagaggcagtgttgtccgctatgttgttttgccgcaggcagaggtggatcggggt
ttactggaagatgccaccaggagagtatcaagcagggcggtgtcgtttctgagccttgtg
tttaatccgccgggattcaagggatctctgcatactcgtatcatctgcgagtgcatcgat
ccaaccggtctccctcctcgtcttaagcagcaaatcaagcaaacaaggctcgataaatct
atcaaatga
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