Paracoccidioides lutzii Pb01: PAAG_01892
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Entry
PAAG_01892 CDS
T02230
Name
(RefSeq) general negative regulator of transcription subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAAG_01892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbl03019
]
PAAG_01892
Messenger RNA biogenesis [BR:
pbl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PAAG_01892
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PAAG_01892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
GDH_HM3
Motif
Other DBs
NCBI-GeneID:
9099205
NCBI-ProteinID:
XP_002796004
UniProt:
C1GTP7
LinkDB
All DBs
Position
Unknown
AA seq
2347 aa
AA seq
DB search
MSFPSSAQSLIASGTDKPSASRTARSQPSAWGPSASQSNVRRGPAPLCTNLSNSNISGSP
PQRPPQSQSPAPSASVTSPLTSTFSAILSSSTRLSNTRRNPSPAPTPVSFSSLQQTGGQQ
QQQSGQTISSPKTRSLTPSSTSHLATSTASSGGSGGGGGGGGGGGGVGGAGISRSAAFSP
LLTGTTINSPTGFPSDKSGSAATSGVNTSQSSLSKISVAQVFLLLDSINEKEGKEKWETK
AAQIHKLVDSNGMEVFAKYFRRLLSGNAPQIFPGINKVVENAGNYPLLVQEVHKVSQDLE
QAGKIAETIDASDGDIFRDFDLSTFLDHFKLDPIAKVSLTLAFKNVSKADLRTKADAILT
NSTPQFLHSLSAISESNKDFSTSFISLTLERFILYPPRNFDDDIKQKLVYACRTRYQSTD
MDVPSEIESVLQMFGLSDPLLSLVRQIQIRGPKSMNSQDSIVETINSIGPSGWSEEQIAS
TLLYMIISPNWLQFSPELLLTTVQNHQRTEPFNWSAFMQAFDRGGLVIDPNQFVRLFNAL
VAVSNDNPAVDVQRLWSGEWENRDTQLSFLSAALSANIDVSRIPNFHPTFSPNIFSDASE
TVRQQAEQAQHSLLRSRDTVKAIFDLVLKTPGTWSLPDSQRFVKTVLQHDLPIFLCSALA
IPQPWSTVQINFVMRSFSIFVAKRQDGYQFALHGVWKLNREWVVEQLFHGFTQDPSCTER
IYEHAVEHGWLDYILEFTNGLAMDLASLAHRKDDYDLEQWVKRAAQKAPIDMGSLLSKFL
KIKADDELRVQRKEQPTPQMVSLSVKTVYALLQILEDYIVDHETLTPIQRICLQTYPRLI
NYGEGFDDIIEANGTHGNAIPEEIDKQMQELFGKMYHEELSLREILELMRRYKTSRDPAE
QDLFTCMVHGLVDEYNCYHTYPLEALTKTAVMFGGIINFKLISGIPLKVGLGMILDAVRE
HEPHQPMYKFGVEAIEQLINRLPEWAGFCNLLLQIPSLQGTTIYRKAEEVLRDQGHHPVK
EDGGAELNGLPDGLAMTNGNIDDLLATDTTQRKFSSLHVDPPLRPEIYRDPDEEVHDKIL
FILNNVSEQNINVKLKDLKDVLQEEHHQWFASYLVEERAKLQPNFQKLYLDLLELIGDKT
LWMEVLRETYVSAIRLLNAESTLNSATERTHLKNLGGWLGSLTIAKDKPIKHRNIYFKEL
LIEAFDSQRLMVVIPFTCKVLVQAMKSTIFKPPNPWLMDILALLMEIYHFAELKMILKFE
IEVLCGDLQLDYKAIEPSTCIRERPAQLEDGISSANIPEGLEAFEDMSLSNMNRVIRNER
ISSTSIISSLPNLDQILVFPPSASTMADPGVLRQIVHSAVERAIAEIITPVVERSITIAS
ISTAQLILKDFAMEPDEEKVRQAAGTMVRALAGSLALVTCKEPLKMSMTNYIRMIQQEFS
DQPMPEGLILMCVNDNLDAACGIVEKAAEEKSLPEIEKVIESQLEARRRHRATRLNEPFI
DPSISRWGFFIPEPFRQVPGGLNKEQLAIYENFARQSRGAGHSHIQNASTDSGKQIPDVL
QEPFPAIPNLSTPAEQPAVPHHVAQTQQESSLQQPAVAAAQGQMNGFLDNANPREKVEAL
VSQLQLSARNVSEERLKDLGRDSAILQDYNQVFRTILTAPNGEDLARLVALKICTTLYSR
TESRLEIELLVHILAKICELSSLVARYTWAVLADVDDEHMFNVPVTVALIDAGLLDLQRV
DMILAKLIQEKNVPALEVLSNLIDQVLLNDEPSALRSDFSGSLDAMNKWVVENPDLSVAK
DIIRKLRESGIPETANALLTDQARSKRDQMEYIFSEWIGVYKFASSNDRTYSTFLKDIHQ
RQVMNNQEDSALFFRLSIDISVAMFEHECQNPNGNIDEAFLYIDALAKLVILLVKFQGES
SGAVKASKPVYLNSILSLLVLVLNHHQVMRGDSFNQRVFFRLFSSILCEYSMCGLEKTDQ
HKEMMSVFADKFLSMQPKHAPGFVYAWLALISHRVFVSGMLNLPDQSGWESYSEIMQVLL
PYIGDQLKPANVSFVAKDLYKGVLRIFLLLHHDFPEFVAENHYQFCNVIPSHCAQLRNLV
LSAYPSSFQKLPDPFRDGLKIERIDEIRKAPKVAGDVVASIRRANLTDVVDNAFRSTVTD
SAVQQICDAVSNPAVNKTGYFYTPINVDVTLLNALVMYIGQNAVTSSQKGSASAMFNNCP
HTTLLEKLSRAFQPEARYYFFSAIANQLRYPNSHTHYFSFVILHLFGSEQPDQDSDIREQ
IIRALLERLVVHRPHPWGLIITVQELLQNGNYAFFRLPFIQSTPEISNLFNVLLQHIQHQ
SPRAALT
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcccttcttccgctcaatctttgattgcttctggcaccgacaagccatcagct
tccaggacggcaagatcccagccgtctgcctggggtcccagtgcgtcccaatccaacgtc
cgccgtggtcccgctcccctttgcaccaacctctccaactcaaacatcagtggatcacct
ccccagaggcctccccaatctcagagtccagctcccagtgcatctgtaacatctcccctg
acgtccacattttccgccatcctgtcatcctctacccgcctgtccaatactcgaaggaat
ccttctcctgcacctacacctgtatctttctcctcgcttcaacaaactggcggacaacag
caacaacagtcaggccaaacaatctcatctccaaaaactagatccctcacaccttcctca
acctcgcatctggctacctcgacggcttcaagcggaggcagtgggggtggtggtggaggt
ggaggtggaggtggtggagttggtggcgcgggtatatccaggagtgctgcgttttctcca
ctgttgacggggacaacaatcaactcaccgacaggattcccatctgacaagtccggatct
gccgcgacatcaggtgttaacactagccagtcatctctgtcaaaaatttccgttgctcag
gtgttcctcctattggattccatcaacgagaaggaaggaaaagaaaagtgggaaactaaa
gctgctcaaattcacaagctggttgattcaaacggcatggaagtttttgcgaaatatttt
cgtcgcctactttctggcaacgccccccagatcttcccagggatcaataaggtggtggaa
aatgcaggaaactatcctttgctagtacaggaggttcacaaagtgtcacaggacctggag
caagccggaaagattgctgagaccattgatgcatctgatggtgatatatttcgtgatttt
gacctctcaactttccttgaccacttcaaattagatcccatagccaaagtctcattgaca
cttgcctttaaaaatgtcagcaaggcagatttgcgcacaaaagctgatgccatccttacg
aactcaacccctcaatttctgcatagtctctcagcaatctctgaatcaaacaaagatttc
agcacgtcatttatcagtctcaccctagaacgctttatcctttacccacctcgtaatttc
gacgacgatattaaacaaaagcttgtatacgcgtgccggacgcgataccaatccacagac
atggacgtgccttcagaaattgaatccgtcttgcagatgttcggattatctgatcccctg
ctgtctctagttcgtcaaatacagattcgaggacccaaatcgatgaacagtcaagacagc
atcgtggagactataaattcaattggccccagtggctggagcgaagagcagatcgcctcc
actcttttatacatgataatttcccctaactggctccaattctcccccgaattacttctc
accactgtccaaaaccaccaacgaaccgagcctttcaattggtcagctttcatgcaggcc
tttgaccggggtggcctggtcatcgatccgaatcaatttgttcgactattcaatgctctc
gtagctgtttccaacgacaatccggctgtcgatgttcagcggctttggagtggagaatgg
gaaaaccgagatacccagctgtcctttttatcagcagccctctccgccaacatcgacgtt
tcacgcattcctaactttcatccaactttctctcccaacatttttagtgatgcttctgag
actgttcgtcagcaagctgaacaggcccaacatagcttgcttcgctcgcgtgacacagtg
aaagccatctttgatctcgtccttaaaacccccggaacatggagccttccggacagccaa
agatttgtcaaaacagttcttcagcacgatctccctatattcctgtgctctgcgttagct
atccctcaaccatggagcaccgttcaaatcaacttcgtcatgcgatctttttctattttc
gtcgccaagcgccaagatggttaccaatttgcgcttcatggtgtttggaagctcaatcga
gagtgggtggtagaacaactctttcatggatttactcaggacccttcgtgtactgaacgt
atctacgagcatgctgtggaacatggctggctagactacattttggaattcaccaacggt
ctagctatggacctagcgtcattagcacaccgaaaggatgactatgatctcgaacagtgg
gtcaagagagctgctcaaaaagcccctatcgatatggggagcctgttgtcgaaattcttg
aaaatcaaggccgatgatgaactacgtgtccaaaggaaagaacagccaacaccccaaatg
gttagcctgtcagttaaaacagtctatgcgcttctacagattcttgaggactacatcgtg
gatcatgaaaccttgacgccaatccaacgcatctgtctacaaacttatccacggttgata
aactatggagaaggattcgatgatattatcgaggctaatggaacccatggcaatgcaatt
ccggaagaaatcgataagcagatgcaagaattattcggcaagatgtatcacgaagaactt
tctctgcgcgagatcctcgaattgatgcgacggtacaaaacatcgcgcgacccagcagag
caggatttatttacttgcatggttcatggccttgtggatgaatataactgctaccacaca
tatccactggaggcattaaccaaaacagctgtcatgttcggtggaattattaatttcaag
ctaatttccggtatcccactcaaggttggccttggaatgatactcgatgcggtgcgggaa
cacgaacctcatcaaccgatgtacaagtttggcgttgaagctatcgaacaattgataaac
cgccttccagaatgggctggattttgcaatcttcttttgcaaattccctctctccaggga
actacaatctaccgtaaagccgaagaagtgctccgagatcagggccaccacccagtaaag
gaagacggtggagctgagttgaatggattacccgatggcttggctatgactaatggcaat
attgatgacctcctagccactgataccactcaacgcaaattttcttcacttcacgtcgac
cctccacttcgcccggagatttatcgtgacccagatgaagaagttcacgacaaaatactc
ttcattttaaataatgtttccgaacaaaatattaatgtgaagctaaaagatttaaaagat
gttttacaggaagaacatcaccagtggttcgcctcatatcttgtggaagaacgagcaaaa
ttgcaaccgaattttcagaaactttacctcgaccttttagaacttatcggcgacaagacc
ctttggatggaagttctcagggaaacttatgttagcgccatacgtttgctgaatgcagaa
tctaccctgaactcagcgactgagcgcacgcatttgaaaaatttgggtggatggcttggt
tctctaaccatagccaaagataagccgataaaacataggaacatctacttcaaggaactc
cttatcgaagcattcgatagtcaacgcctcatggtcgtcataccattcacatgcaaagta
ctagtgcaagccatgaaatccacgattttcaaaccccccaatccttggctaatggatatc
cttgctcttttgatggagatataccatttcgcggaactgaaaatgattctcaaattcgaa
atcgaggttctttgtggagatctgcaacttgattacaaggctatagagccctcgacttgt
atcagggagcggccagcacagctggaagatggcatctcgtcagcaaatattcctgaaggt
ctggaggcgtttgaggatatgtcactcagcaacatgaaccgcgttattcggaatgagaga
atatcctcgacctcgatcatttccagtctccctaatttagatcaaatcttggtgttcccc
ccctcggctagtaccatggctgatcctggcgtcctgaggcaaatcgttcatagcgcagta
gagcgagctattgccgaaatcatcacacccgttgtcgaacggtctattacaattgcatcg
atctcgacggcccagctgattctaaaagacttcgcgatggaacctgatgaggaaaaagtt
cgccaagcggccgggactatggttcgtgcgctggcaggtagtttggcgcttgttacgtgc
aaggaacccctaaaaatgagcatgacaaactatattcgaatgattcagcaagaattctcc
gatcagcctatgcctgaaggcctcatcctcatgtgcgtcaatgataacttggatgcggct
tgcggtatcgttgaaaaagcagcagaagagaaatctctccctgagatagaaaaagtcatc
gagtcacaacttgaagcccgtcgtcgccaccgtgcaacgcgtcttaacgaaccgtttatc
gatccttctattagtcgatggggatttttcatcccagaaccgtttaggcaggttcctggc
ggcctgaacaaggaacagctggccatatatgagaattttgcgcgccaatcccggggagcc
ggtcatagccacattcaaaatgcatcgactgactccgggaaacaaattcctgacgttctc
caggagcctttccccgctattcctaacctatccactccggctgaacagccagctgttcca
caccacgtggcacaaacgcagcaggaatccagcctgcaacaacccgccgtcgctgctgct
caaggccagatgaacggtttccttgacaatgctaaccctcgcgagaaagtagaagctctt
gtttctcagctgcagctctcggctcgaaatgtttcagaagagcgtttaaaggaccttgga
cgcgatagcgccatccttcaggactataatcaggttttccgcacgatcctgaccgcaccg
aacggcgaagatttggcgcgattggtggctctcaagatatgcaccacgttgtattctcgc
accgagagccgtttggaaatcgaacttcttgtacacatactggctaagatctgtgaacta
tcttcccttgttgctagatatacctgggctgtacttgccgatgtggatgatgaacacatg
ttcaatgtgccagtcactgtcgcccttattgatgcagggcttttggatcttcaacgtgtt
gatatgatcctcgcaaaactcatccaggagaagaatgttcctgccctggaagtgctctcc
aaccttatcgaccaagtccttctgaacgatgaaccttctgctctgcgatcggacttttca
ggcagtctagacgcgatgaataaatgggttgtcgagaacccagatctcagtgttgctaag
gacattatccggaagcttcgtgaatcgggcataccagaaacagccaacgcacttcttacg
gaccaggcccgttcaaagcgagaccagatggaatacattttcagtgaatggattggcgtg
tataaatttgccagttctaacgacaggacttacagcacattcctgaaagatatacaccaa
agacaggtcatgaacaatcaagaagattcggctctattctttaggctcagcatcgatatc
tctgtagccatgttcgaacatgagtgtcagaatccaaatggaaacatcgatgaagccttc
ttatatattgatgcgctcgcgaaattggtgatcttgctggttaagtttcagggcgagagc
tctggagccgtcaaggcaagcaagccagtctacttgaactccatcctttcgcttctggtt
cttgtcttgaaccaccatcaagtgatgaggggcgacagtttcaaccaacgggtgtttttt
aggcttttctcaagcatcctttgtgaatactccatgtgtggcttggagaagacggaccag
cataaagaaatgatgtccgtttttgccgacaaattcctgtccatgcaacccaagcacgca
cccgggtttgtctatgcatggctggcactgatatcccatcgtgtcttcgtatctggaatg
cttaacctgccagatcaatcggggtgggaatcgtatagtgaaattatgcaagttttgctt
ccatacatcggcgaccagctaaagccagccaatgtttcatttgttgcaaaagatctatac
aaaggcgttcttcgcattttccttctgctccaccatgattttcccgagttcgtagcggag
aaccactaccagttttgtaatgtcatcccatcgcactgcgcgcaattgcgaaaccttgtc
ttgagtgcgtacccatcgtcgttccagaaactacccgatccattcagagatggtttaaaa
attgaacggatagatgaaatccgcaaggctcccaaagttgctggtgatgttgttgcttct
attcgacgtgcgaatttgaccgatgtagttgataacgcattccgatcgactgtaactgac
agcgcggttcagcaaatttgtgatgctgtatcaaaccccgctgtcaataagacagggtat
ttttacactccgataaacgtggatgttaccctattgaatgcgctcgtcatgtatattggg
caaaatgcagttacatctagtcaaaagggtagcgcatccgcaatgttcaacaactgccca
catacaactttgctcgagaagctttccagggcctttcaacccgaagctcgatattacttc
tttagcgctattgccaatcagctgcggtatcccaacagccatacgcattacttcagcttt
gtcatcctccatcttttcgggtctgagcagcccgatcaagactcggatattcgcgagcag
atcattcgggctctccttgagcggctggtcgttcatcgaccccatccctggggcttgata
atcacggtgcaggagctacttcagaatggcaattacgctttcttccgcttgccatttatt
caatcgacgcctgagattagcaatcttttcaatgtgctgcttcagcacatccaacatcaa
agcccgagggcggcgctgacttaa
DBGET
integrated database retrieval system
