Paracoccidioides lutzii Pb01: PAAG_02108
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Entry
PAAG_02108 CDS
T02230
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pbl
Paracoccidioides lutzii Pb01
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbl03009
]
PAAG_02108
Enzymes [BR:
pbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PAAG_02108
Ribosome biogenesis [BR:
pbl03009
]
Eukaryotic type
Pre-60S particles
Helicases
PAAG_02108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
9099365
NCBI-ProteinID:
XP_002796220
UniProt:
C1GUB3
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MPPAISQNSKLRAWDALTPPLSGWILDAISSMGFSRMTPVQASTIPLFIAHKDVVVEAVT
GSGKTLAFLIPMVERLLRLDSPIKKHHIGAIIISPTRELATQIYNVLQSLLAFHGPSATR
LQSAEIGICEQNESNPPLPYPSSVLKIVPQLLLGGTTTPAQDLSTFLKQSPNVLISTPGR
LLELLASPHVHCPQSSFEVLVLDEADRLLDLGFQEDLQKILQRLPKQRRTGLFSASVSEA
VDQIVRVGLRNPVKISVKVKGAGSEDKRTPASLQMTYLLTPPPHKLPAVKNILSSIHPSP
QKSIIYFSTCAAVDYFQDILSSILPEQFETIPLHGKHPPQVRQKNFARFVNSVASSILLT
TDVAARGLDIPSVDLVIQIDPPTDPKAFLHRCGRAGRAGRRGLSIILLHPGREEDYISFL
NVRKTPVTAYQCQSSPICISDEDATNATETIRKLVRQDRAIHDKAQKAFVSWVRSYSKHQ
ASSIFRVTDLNWEDLGRAWGLLRLPKMPELKNFTGDRYLGVEGMDWDNYAYKDKQREMRR
REELNERANNADGIASNAKRPFKRPATRSESIPWSQNLKKRSEKESRRERKKARRDRELW
SKMTVDERNKVRETERMVDAVRKAVRKQSGLQTGDALEEEF
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcctccagctatttctcaaaattcaaagttgagggcatgggatgctctcactcctcct
ttatcgggatggattcttgatgccatctcgtccatgggcttctcccgcatgacgccagtg
caggcttcaactattcctctttttatagcgcataaggatgtagttgtcgaggctgttacc
ggtagcgggaaaacattggcttttttgatccccatggttgaaaggctcttgcgacttgat
tctcctattaaaaagcaccatatcggagcaataatcatttcccccactagagaactggct
actcaaatatacaatgttttgcagtccctcttagcatttcacggtccttccgcgacccgt
ttacaatctgcggagatcggcatttgcgaacagaatgaatccaatccaccgctgccatac
ccttcttccgtgttaaaaatagttccccagctacttttaggtggcactacaactcccgca
caagatctaagtacatttttaaaacagtcgcccaacgttctcatttcgacacctggccgc
cttctcgagctgctagcttccccccatgtgcattgcccacagtcttcgtttgaggttctt
gtccttgatgaagcagatagactcctagatttaggcttccaagaagatctacaaaagatt
cttcaacggttaccaaaacaacgacggaccgggttattcagtgccagcgtcagcgaagct
gttgatcagatagtccgcgttggcctgcggaaccctgtcaaaatttcggtcaaggtgaaa
ggtgcaggatctgaagacaaacgaactccagcgagtttacaaatgacctacctcctcacc
ccgcccccccataaactcccagccgttaaaaacatcctctcatccatccacccttccccc
cagaaatccattatctacttttccacctgcgccgcagtagactattttcaagacatcctc
tcttccatccttcctgaacaattcgagacaattccccttcacggcaagcacccaccccaa
gtccgccaaaaaaactttgctcgctttgtcaactctgtagcctcctccatccttttaaca
acagacgtcgcagcccgcgggcttgacattccatctgtagatttagtaattcaaatagac
ccccccacggacccaaaggctttcctccatcgctgtggacgcgcaggtcgcgcaggacgc
cggggcctcagcatcatcttactccacccaggccgggaagaagattacatctcgttcctc
aacgtgcgcaaaacaccagtgacggcataccaatgccaatcttcaccgatctgcatatct
gacgaagacgcgacgaacgctacggagacaatccgaaagcttgtccgacaggaccgcgcg
atccatgacaaggcacagaaggcctttgtcagctgggtgaggagctacagcaagcaccaa
gctagcagcattttccgtgttacggacctgaattgggaagatctgggacgggcatggggt
ctattgcgtttacccaagatgcctgagttgaagaattttactggtgatcgatatttaggg
gtggaaggaatggactgggataattatgcgtataaggataagcaaagggagatgcgtcga
agagaggagctaaatgaacgggctaataatgctgatggtattgcttctaatgctaagagg
ccctttaaaagaccagctacacgcagtgaatctattccatggagccagaacctgaagaag
agaagtgagaaggagagcagacgagaacggaagaaagctaggagagatcgtgaactatgg
agcaaaatgacggtggacgagagaaacaaagtacgagagacagaacgtatggttgatgcc
gttcgaaaggctgtaaggaaacaatctggacttcagacgggtgatgctttggaagaggaa
ttttga
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