Paracoccidioides lutzii Pb01: PAAG_02403
Help
Entry
PAAG_02403 CDS
T02230
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAAG_02403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbl03041
]
PAAG_02403
03009 Ribosome biogenesis [BR:
pbl03009
]
PAAG_02403
Enzymes [BR:
pbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PAAG_02403
Spliceosome [BR:
pbl03041
]
Complex A
U2 snRNP components
U2 related factors
PAAG_02403
Complex B
PAAG_02403
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PAAG_02403
Ribosome biogenesis [BR:
pbl03009
]
Eukaryotic type
90S particles
Helicases
PAAG_02403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
SRP54
AAA_19
Flavi_DEAD
ABC_tran
T2SSE
AAA_30
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
9099060
NCBI-ProteinID:
XP_002795697
UniProt:
C1GUT0
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MGDQRLDGDSSSRAKKRQKTETADMDPRQNKYLAHWYEDEKKPSNGYSAEGSILDEFERH
KTTAAMAREAEDAAVNPFNGKPLSNRYFSILKQRRDLPVHSQRDEFLQLYQQSQILVFVG
ETGSGKTTQIPQFVLFDDLPHQRGKLVACTQPRRVAAMSVAERVAAEMDVKLGEEVGYSI
RFEDMTSQKTMLKYMTDGMLLREAMHDHDLKRYSTIILDEAHERTMATDVLMGLLKEVVQ
RRPDLKLIIMSATLDSQKFQRYFCDAPLLAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQ
IHANEPEGDILLFLTGEEEIEDSVRKISLEVDEMIREADAGPMKVYPLYGSLPPGQQQRI
FEPAPPPRREGGRPGRKCIVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVS
PISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSSTVLDLKKLGI
EDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPALAVMLISSP
EFYCSNEILSITSLLSVQQIFVRPAAQRKRADEMKNLFAHPDGDHLTLLNAYHAFKSPEA
QANPRQWCHDHFLSLRALQSADNVRQQLQRIMEREEIELVSTPFEDKKYYENIRRALVAG
FFMQVAKKESQGKNLYRTVKDNNEPVLLHPSSVLGHEAEWVLYNEFVLTTKSYVRTVTAV
KGEWLLDIAPIYYDISSFPKGEIRSALIRAMERLSRKEKMRADKEKRH
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcagcgactcgacggtgacagctcttcccgtgcgaaaaagaggcagaagacc
gaaactgcagacatggaccctcgtcagaacaagtacttagcccactggtatgaggatgag
aagaagccttcaaacgggtattccgctgaaggttccatcctggacgagtttgagcgacac
aagacaacggctgccatggccagagaagcggaggatgctgcagtaaaccccttcaatgga
aaaccactttcaaaccgctatttttcgatcttgaaacagcgaagggatctgcccgttcat
tctcagagagatgagttcttacaactgtaccagcagtcgcaaatcctcgttttcgtcggt
gagaccggttcgggaaagactactcagatccctcagttcgttcttttcgacgaccttccg
catcagcgcggtaaactggtggcatgtactcagcccagacgagttgcagctatgtcggtt
gcagagcgcgttgcagctgagatggacgttaagcttggggaggaagtcggttacagtatt
cgatttgaggacatgactagtcaaaagacgatgctgaaatatatgacggatggaatgtta
ttgcgtgaagcaatgcatgatcatgacctgaaacgctacagcactattatcttggatgag
gcccatgagagaacaatggccactgatgtgctcatgggtttgcttaaggaggtggttcaa
cgtcgaccagatcttaaattgattatcatgtcagctaccctggattcccagaagttccag
cgatacttttgtgatgcgccactcctcgcagtccccgggcggacccatcctgttgaaata
ttttataccccggagccagagcaagattatgtggaggcggctattcgaacagttttgcag
attcacgccaacgagcctgagggtgatatcttactcttcttgactggtgaagaggaaatc
gaagactctgtgcgcaagatatctcttgaggtggatgagatgattcgagaggccgacgca
gggcccatgaaagtttatcctctctatggaagtttacctcccggtcaacaacagcggatt
ttcgaacctgccccgcccccccgcagggaaggagggcgacccggacggaagtgcatcgtg
tctaccaacattgcggaaacctctctgactatcgacggtatcgtgtatgttgtggaccct
ggattctccaagcagaaggtatacaatccacgtatccgtgttgagtcgttgttggtatca
ccaatttccaaagcctcagcccagcagcgtgctggtcgtgccggccgtacgcgccctggg
aaatgtttcagactatataccgaagaggcgttcaagaaagaactcattgaacaaacatat
ccggaaattctccgctccaatctatcgtccacagtattggaccttaaaaagcttgggatc
gaggatctagtccacttcgaccttatggatccaccagcccctgaaactctcatgcgagct
ttggaagaactcaactatctggcttgtttggatgacgatgggaatcttactccgttaggc
cgtcttgcatctgagtttccgttggaccctgcccttgcagtgatgttaatcagctcaccg
gaattctactgttccaacgagatcctttcaattacctccttgctttccgtccaacaaatc
ttcgttcgccccgccgcccaacgcaagcgtgctgatgaaatgaagaaccttttcgcacac
ccggatggcgatcaccttaccctcttaaatgcgtatcacgctttcaaaagtcctgaagcc
caagccaacccacgccagtggtgccacgatcatttcctttcccttcgagccctacagtcc
gcagataacgtccgccagcagctgcagcgtatcatggaacgtgaggagatcgagcttgta
tccaccccattcgaagacaagaagtattacgaaaatattcgtcgcgcattggttgcaggc
ttttttatgcaagtcgctaagaaagagagccagggaaagaatctatatagaactgtcaag
gacaacaatgagcccgttttgctgcatcccagcagtgtccttggacacgaagcggaatgg
gtcctgtataatgagtttgtgcttacaacaaagagctatgtccgaacagtcactgcggtg
aagggagagtggctcttggatattgcaccgatttattacgacatatccagctttcccaag
ggtgagatccgctccgcgcttatccgtgccatggaacgtctttctcgcaaggagaagatg
cgtgctgacaaggagaagaggcactga
DBGET
integrated database retrieval system
