Paracoccidioides lutzii Pb01: PAAG_03080
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Entry
PAAG_03080 CDS
T02230
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAAG_03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbl03019
]
PAAG_03080
Messenger RNA biogenesis [BR:
pbl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PAAG_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
PAT1
Ndc1_Nup
NST1
TFIIA
Otopetrin
Motif
Other DBs
NCBI-GeneID:
9097817
NCBI-ProteinID:
XP_002794535
UniProt:
C1GYC6
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MLQTQSQHLFSHQHQYPQTAADASWIQQQQQHQQQQQQQQQQQQQQSSHYQQQQQQHQQQ
QQQAQSQQHHPQSSLAAQQHAQAQAAVAAAAAVAQHQHYNRIALNSSSAASAVAAAGNQA
ASGVDSAAAGAGNIDGGISEENRRVLVWVAELMDPARREAALMELSKKREQVPELALIIW
HSFGVMTSLLQEIISVYPLLNPSQLTAAASNRVCNALALLQCVASHNETRTLFLNAHIPL
FLYPFLNTTSKSRPFEYLRLTSLGVIGALVKNDSSDVINFLLTTEIIPLCLRIMETGSEL
SKTVAIFIVQKILLDDIGLAYICATYERFYAVGTVLSNMVTQLVEQQTVRLLKHVVRCFL
RLSDNNRAREALRQCLPEPLRDATFSSVLRDDAATKRCLAQLLINLSDNVVDGTSTGATM
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttacagactcaatcccaacaccttttctcacatcagcatcaatatccccagacagct
gcagacgcttcctggatccagcagcaacagcagcaccaacagcagcaacaacagcagcaa
caacaacagcagcaacagtcctcccattaccagcagcagcaacagcaacatcaacaacag
cagcagcaggcgcagtcccaacagcaccatccccagtcatctctggcagcccaacagcat
gctcaagcgcaggcagcggttgccgctgcggctgctgtggcccaacaccaacattacaat
cggatagccttgaatagtagctctgctgcttccgctgtcgctgctgctggtaaccaggct
gcgtccggtgtagatagtgccgctgctggtgctggcaatatcgatgggggtatcagcgaa
gagaatcggagagtccttgtgtgggtggctgagcttatggatcctgctcggcgagaggct
gctttaatggagcttagcaagaagagggagcaggtgccggaactcgctcttataatatgg
cattccttcggtgttatgacctctctacttcaggagattatctctgtttatcctctattg
aacccatcccagttgactgctgcggcctcaaatagggtttgcaacgctctcgctctgtta
caatgtgtggcttcgcacaacgagacgcgcactcttttcttgaatgcacatatccctctt
ttcctttacccatttcttaacaccacctcgaaatctcgtccgtttgaatatctccgtctc
acctctcttggtgtaatcggcgcgttggtgaaaaatgactcgtcagacgtcataaacttc
ctgctcacgacggaaatcattcccctatgccttcgcatcatggaaacaggctccgaacta
agcaagactgttgccatctttattgtacaaaagatcttactggatgatattggccttgca
tatatttgtgctacttatgagcggttctatgccgttggaaccgtgttgagtaatatggtc
actcagcttgttgagcagcaaactgtgcggctgcttaagcatgtcgttcgttgttttctt
cgtctgagcgataacaatcgcgcacgtgaagccctccgccaatgccttccggagcccctt
cgggatgcaacattctcatcagtcctgcgtgatgatgctgctacgaaacgttgcctagct
caacttctaattaatctgtccgataacgttgtcgacgggacctcgactggcgccactatg
taa
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