Paracoccidioides lutzii Pb01: PAAG_04511
Help
Entry
PAAG_04511 CDS
T02230
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03013
Nucleocytoplasmic transport
pbl03015
mRNA surveillance pathway
pbl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PAAG_04511
09122 Translation
03013 Nucleocytoplasmic transport
PAAG_04511
03015 mRNA surveillance pathway
PAAG_04511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbl03019
]
PAAG_04511
03041 Spliceosome [BR:
pbl03041
]
PAAG_04511
Enzymes [BR:
pbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PAAG_04511
Messenger RNA biogenesis [BR:
pbl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PAAG_04511
Spliceosome [BR:
pbl03041
]
Complex C
Other components
EJC/TREX
PAAG_04511
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PAAG_04511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
9096693
NCBI-ProteinID:
XP_015699517
UniProt:
C1H167
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MSHEEDLIDYSDEELQATDAAAASIAPAGTNGAALKKEGDLTVSGVRADKKGSYVGIHST
GFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLH
QLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKD
NYPNIVVGTPGRLNALVRDKKLSLRSIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQ
VMMFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLLQYYIKLSESEKNRKLNELLD
SLEFNQVIIFVKSTQRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVA
TDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDI
EKRFEVALPEYPEGGVDSSAYMA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaagaagatctcatcgattattccgatgaggagcttcaggcaactgatgct
gctgcagcctccatagccccagctggcaccaacggtgctgctcttaaaaaagagggcgac
ttgacggtatctggcgtgagagccgataagaaaggaagttatgttggtattcattcgact
ggcttccgcgatttcctcctaaaaggggaacttttgcgtgcgatcaccgattgcggcttc
gaacatccatcggaggtccaacaagtttgcatcccgactgctattctgaatgtcgatgtt
ctgtgccaggccaagtccggtcttggaaaaacggccgtctttgtcctaacaactcttcac
caactggaaccagttcctggcgaatgctccatacttgttatgtgtcacacccgagagctg
gcatatcagatcaaaaacgaatatgctaggttcagcaaatatcttccagatgtgaaaact
gccgttttctatggtggaactccaatgcagaaggatattgaattgctctcttcgaaggac
aattatcccaacattgttgttggcacccctggtagattgaatgctcttgttcgtgacaag
aaactttcccttcgaagcatcaaggcgttcgttctcgatgagtgtgataagatgttggat
caaatcgacatgcgacgtgacgttcaggagattttccgtgccaccccagctgacaaacag
gttatgatgttcagcgctaccctctcgcaggaagtccggcccatttgcaagaagtttatg
cgcaatccccttgaggtgtatgttgatgacgacactaagctgaccctccatggtcttcta
caatactacattaagctcagcgaatcagagaaaaaccgaaagttgaacgagctattagat
agccttgaattcaaccaagtcatcatcttcgttaagagcacccaacgtgcgaccgagtta
gataagcttcttcgtgaatgcaacttccccagtatcgctgtccactctggcgtttcccag
gaagagcgtatcaaacgatacaaggagttcaaagagttcaacaagcgtatctgcgtggca
acggacgttttcggtcgtggcatcgatattgaacgaatcaatttggccatcaactacgac
ttgcccgcggatgcggattcttaccttcaccgtgttggtcgtgctggtcgtttcggcacc
aagggtctagctatctccttcgtgagcagcgagcaagaccaagaagttctcaaggacatc
gagaaacgatttgaagttgcccttcctgaatatcccgaaggcggtgtcgactccagcgct
tatatggcataa
DBGET
integrated database retrieval system
