Paracoccidioides lutzii Pb01: PAAG_05508
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Entry
PAAG_05508 CDS
T02230
Name
(RefSeq) small nucleolar ribonucleoprotein complex subunit (SOF1)
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pbl
Paracoccidioides lutzii Pb01
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbl03009
]
PAAG_05508
04121 Ubiquitin system [BR:
pbl04121
]
PAAG_05508
Ribosome biogenesis [BR:
pbl03009
]
Eukaryotic type
90S particles
Other 90S particles
PAAG_05508
Ubiquitin system [BR:
pbl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PAAG_05508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
MIOS_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF12
WD_LRWD1
NBCH_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
9095870
NCBI-ProteinID:
XP_015699822
UniProt:
C1H415
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MKIKTLSRSAALLQEPGSNTSKLPRNLDPAQHPFERAREYTRALNATKLERMFAAPFVAQ
LGHGHVDGVYCLAKDPVSLERFASGSGDGVIKVWDLATRDEIWHADAHENIVKGMCWTSD
RKLLSCAADKTIKLFDPYNSASDTPPLATYFGQSAFTGVSHHETLPSFASSSSVISVYDL
SRPSSTPSQTLHWPTSTDTITSLAFNRTETSILGSTATDRSIIMYDLRTSLPVTKLILKF
ASNAISWNPMEAFNFAVANEDHNIYIFDMRKMDRALNVLKDHVAAVMDVEFSPTGEGLVS
ASYDRTIRLWDRSKGHSRDIYHTKRMQRVFSAKFTPDNKYVLSGSDDGNIRLWRAEASSR
SGIKSARERQKLAYDEALKQRYAHMPEIRRIKRHRHLPKAIKKAGEIKAEEIAAIKRREE
NLRKHTKKKGEMPRRSEREKMILAKEQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaacgctttcaagatctgctgcattgctgcaggagcctggctcaaatacg
tcgaaacttccccgaaatcttgatcccgcacagcatccattcgagagagcgcgggaatat
acgagagcactcaatgccacgaagctagagcgtatgtttgctgctccctttgtggctcag
cttggacatggacacgttgatggcgtatattgcctagctaaagaccctgtgtccttggag
cgttttgctagcggaagtggtgatggcgttatcaaggtttgggatctggctactcgagat
gagatatggcatgccgacgcacacgagaatattgtcaagggcatgtgctggacgtcagat
agaaaactgctttcatgcgcagcagataaaacaatcaaactcttcgatccttacaactca
gcatccgatacccctccgctggcgacatattttggacaatccgcatttacaggtgtttcc
caccatgaaacccttccctcattcgcctcatcttcctccgtaatatccgtatacgaccta
tccaggccgtcttccacaccttctcaaaccctccactggcccacaagtaccgacacaatc
acctccctagccttcaaccgaacagaaacttcaattcttggctcgacagccacagaccgg
tcaattattatgtatgatctccgaacttcgttaccagtcacaaagttgatcctcaagttt
gcctccaacgcaatttcctggaacccgatggaagcgtttaatttcgctgtcgccaatgaa
gatcataatatatatattttcgatatgcggaaaatggaccgggcgttgaatgtgcttaaa
gaccatgttgcggctgttatggatgtagaattcagcccgacaggagaaggcttagttagt
gcttcgtatgaccgtactattcgattatgggaccggagtaagggtcattccagagatatt
tatcacacgaaacgtatgcaaagagtattctccgcaaaattcacaccagacaacaaatac
gtcctgtctgggtcagacgatggcaacatccgtctctggcgcgcagaagcatcttcgcgc
agtggcattaagagcgcacgtgagagacagaaacttgcttacgatgaggctctcaagcag
cggtatgctcatatgcctgagatccgccgcattaagcgtcatcgccatcttcccaaggct
attaaaaaggctggcgagattaaggcagaggagatcgctgctataaagaggagagaggag
aatctacgcaagcacactaagaagaagggagagatgccaaggcgtagcgagagagagaag
atgattttggctaaagagcagtaa
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