Paracoccidioides lutzii Pb01: PAAG_06854
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Entry
PAAG_06854 CDS
T02230
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03020
RNA polymerase
pbl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAAG_06854
09124 Replication and repair
03420 Nucleotide excision repair
PAAG_06854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbl03021
]
PAAG_06854
03400 DNA repair and recombination proteins [BR:
pbl03400
]
PAAG_06854
Enzymes [BR:
pbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAAG_06854
Transcription machinery [BR:
pbl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PAAG_06854
DNA repair and recombination proteins [BR:
pbl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PAAG_06854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Motif
Other DBs
NCBI-GeneID:
9094494
NCBI-ProteinID:
XP_002791308
UniProt:
C1H7W3
LinkDB
All DBs
Position
Unknown
AA seq
1258 aa
AA seq
DB search
MEDYEEEYGEDVYCEQEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEE
QGQVTLDQTLAPSEDEVDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLT
YASPLYLGITKRVTEGRERLISERDDADQDEQDNDEDRRNRGTYLHWEPKALNEDEPEEE
NVFIGRMPIMLKSKYCILKDLNEQALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIV
QVFKKAPPSPTPYVAEIRSAVEKGSRILSQLSIKLFAKGDTSKGGFGPTIRSTLPYIKTD
IPIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGS
SPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYMVHRLLQCALGRRDVDDR
DHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLYLNIGVKASTLSGGLK
YALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTH
WGLVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVLEEFEPQVSPNAT
KVFVNGVWVGVHRDPSHLVSTVQSLRRRNMISHEVSLVRDIRDREFKIFTDAGRVCRPLF
VVENDPKSENCGSLVLSKEHIHKLEADKEIPADLDPEERRERYFGWDGLVKSGVVEYVDA
EEEETIMIVMTPEDLEMSKQVQAGYNLPEEDHTDRNRRVRSNLSQKTHTWTHCEIHPSMI
LGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFDQRMETMANILYYPQKPLATTRS
MEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYTDSEKMVGM
TVVERFEKPMRSDTLRMKHGTYDKVDDDGIVAPGVRVSGEDIIIGKTAPLAPDAEELGQR
TKQHTKVDVSTPLRSTESGIVDQVLISTSNDDLKFVKVRTRTTKIPQIGDKFASRHGQKG
TIGITYRQEDMPFTREGITPDIIINPHAIPSRMTIAHLIECQLSKVSSLRGFEGDATPFT
DVTVDSISGLLREHGYQSRGFEVMYNGHTGRKLVAQIFLGPTYYQRLRHMVDDKIHARAR
GPTQILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLFDVSDPFRVHICDICGL
MTPIAKLKKGDFECRACKNKNKISQVHIPYAAKLLFQELMSMNIAARMFTKRSGVSLR
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggaggactacgaggaggaatatggcgaggatgtctactgcgagcaggaagaagggatt
acgtctgaagattgctggacggtgatttcgtctttcttcgagtcgaaaggtttagtgtcg
caacagctcgattctttcgatgagttcatctccacaacgatgcaggagctggtggaggaa
caaggacaggttacactcgatcagactctagctccttctgaggatgaagtggatcccgtt
gttttgcgtcgttatgagctgaaattcggtacggtgatgcttgcccggccatcgatgacg
gagggcgatggcgccactagtattatgttgccccaggaagcacggcttagaaacctcaca
tatgctagccccctctaccttggtattacgaaacgagtaactgaaggccgggaacgactt
atttctgaacgtgacgatgctgatcaggatgaacaagataacgatgaggatagacggaat
agaggaacatatctgcattgggagcccaaagctttgaatgaggatgagccggaggaagaa
aacgttttcattgggagaatgccaatcatgctgaagtcaaaatattgtatcctcaaggat
ctcaatgagcaggcgttatacaactggaacgagtgtccctacgattccggtggatatttc
attatcaacggaagtgaaaaggtgctaatcgcccaagaacgcagtgctggaaacattgtt
caagtgtttaagaaagctcctccaagccccacaccatacgttgcggaaatccgaagtgcc
gttgagaaaggatctagaatattgtctcaactgtcgattaagcttttcgctaaaggagac
acctccaagggcggttttggtccaacgattcgatcaacgcttccctacattaaaacagac
attcccatcgtcgtcgttttccgggctttgggtgttgtgtctgacgaggatattctcaac
catatttgctatgatcggaatgataccccaatgttggaaatgcttaagccgtgtatcgag
gaaggcttcgtcattcaagatcgtgaagtggcccttgacttcatcagtaaacgaggctct
tcacccacgagcatgaaccacgagaagcgagttagatacgccagggatatcatccagaag
gaattccttccccacatttcgcagagtgaaggaagtgagacgcggaaagcattcttcttg
ggatatatggtgcatcgacttcttcaatgtgctcttggccgtcgcgatgtcgatgatcgt
gaccattttgggaaaaagagactggacctggctggtccactactcgctaaccttttcaga
atccttttcatgagggttacgaaagatctttacaagtatgtccagagatgtgtggaaact
aaccgccagctctatttaaatatcggtgtaaaggcgagcaccctgtctggcggcctcaag
tatgctcttgccactgggaattggggtgaacagaagaaggcagccagttccaaagccggt
gtttcacaagtgcttaatcgctatacatacgcgtctacactttcacatcttcgccgtact
aacacgcctatcggtcgtgacggcaagattgctaaaccccgacaacttcataatactcac
tggggtcttgtatgtccagctgaaacaccagagggtcaagcttgcggtctcgtgaagaat
ctggccttgatgtgttatattactgtcggtacgccaagcgaaccaattatcgactttatg
atccaacgaaatatggaagtcttggaagaatttgagccccaagtgtcgccaaacgccaca
aaagtcttcgtcaatggtgtctgggtgggagttcacagagatccttctcacttagtgagc
actgttcagtcactgagacgacgtaacatgatttcccacgaagtcagtttggtgcgagac
attcgagaccgagaattcaagattttcacagatgctggacgcgtgtgtcgacctctgttt
gtcgtagagaatgatcctaagagcgaaaactgtggctcgctggtactatctaaggaacac
attcacaaactggaagcggataaagaaattccagcagatttggatcctgaagaacgcagg
gaacggtactttggatgggatggccttgttaaatctggtgttgttgaatatgtagatgcc
gaggaggaggagactattatgattgttatgacacccgaggatctggagatgtcgaaacaa
gttcaggctggatataaccttccggaagaagatcataccgataggaatcggcgcgtccga
tcaaatcttagccagaagacgcatacctggactcattgcgaaattcaccccagtatgatt
ctaggtatctgcgcaagtatcattccgttccctgaccacaaccagtctcctcgtaacaca
taccagtcggctatgggtaaacaagcgatgggtgtctttctaacgaacttcgatcaacgc
atggaaacgatggctaacatcttgtactatccacaaaagccccttgctacaacacggtcc
atggagttcctcaaattccgcgagcttcctgctgggcagaatgctatagtggcaattgct
tgctactccggatataaccaggaagattccgtcatcatgaaccagagcagcattgatcgt
ggtcttttccgaagtcttttctaccgaacttacaccgactctgagaaaatggttggtatg
actgttgttgaaagatttgagaagccgatgagatccgacactcttcggatgaaacacggt
acttatgataaagtcgatgatgatggcattgttgctcccggtgttcgtgtttccggcgag
gatatcatcattggtaaaacagctcctcttgcaccggatgcagaagagctgggacagaga
actaaacaacataccaaagttgacgtctctactcctctacgtagtaccgagagcggtatt
gttgaccaggtcttgatttcaacgagcaacgatgatctcaaattcgttaaagttcggacg
cgaacgacaaagattcctcaaatcggggacaagttcgcgtcccgtcacggccaaaagggt
accattggcattacatacagacaggaagacatgcccttcacgcgtgaaggaatcacacca
gatataatcattaatcctcacgccattccatctcgaatgacaattgcccatttgatcgag
tgtcaactcagtaaagtttcgtcactacgtggctttgaaggcgatgcaactcccttcacc
gacgtgacagtagactccatctccggtttgctccgtgaacatggataccagtcccgcggc
ttcgaggtgatgtacaatggccacacaggcagaaagctagttgcgcaaattttcctcggc
ccgacttattaccaacggctgcgacatatggtggacgacaagatccatgctcgcgcacgt
ggtccaacccagattcttacccgccagcctgtggaaggtcgtgctcgagatgggggcctt
cgatttggagagatggaacgcgattgcatgattgctcatggcgccagtgcgttcctgaaa
gaaagattgtttgatgtctctgatcctttccgtgtccacatatgtgatatctgcgggttg
atgacacccattgcgaaactcaagaagggtgactttgaatgccgggcttgtaaaaataag
aacaaaatttcgcaagttcacattccatatgctgccaagcttttgttccaagaattaatg
tcgatgaatatcgctgcacggatgtttacgaagaggtccggagtgtcattgcgttag
DBGET
integrated database retrieval system
