Paracoccidioides lutzii Pb01: PAAG_08016
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Entry
PAAG_08016 CDS
T02230
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PAAG_08016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbl03021
]
PAAG_08016
03019 Messenger RNA biogenesis [BR:
pbl03019
]
PAAG_08016
Transcription machinery [BR:
pbl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PAAG_08016
Messenger RNA biogenesis [BR:
pbl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
PAAG_08016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pfc11_Clp1_ID
Pcf11_C
CID
zf_PCFS4
Zn_ribbon_ISL3
VHS
UBZ_FAAP20
DUF7340
Motif
Other DBs
NCBI-GeneID:
9093336
NCBI-ProteinID:
XP_015700831
UniProt:
C1HB75
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSAGLASDEVAEDYKNSLEDLTGNDKFQISNLTVIAKENTEHAMAISRVLENHIRTTPPA
QKLPALYVVDSVVKNVGTPYTLFLGRNLYQTFMNAYTLVDSQTRKKLDEMLKTWKEPVPG
SLDTRPVFPVEITRSIENALIKARTAALQNQQARSQQDLLGRNRGVVTPPTSTTWQHTPT
PPQVASRYAQSSNQNAPPQHPSNGQLYVSAQCLPIALAVLLLTPTQQSQPYGHPVQEPVD
LGALHRDIDNLISNSRVDFANNPLDPSIQQRLKALLDLQNILQQQKLPQDQLRLIRDQVS
QLSPPSQPPPRAVPTPPVQSVQPMQQSQTSQPNLQALLNPNTIAELLKVRTSQQSLTPPP
PPHIPSFLQQAATSTPPPPPPSTAPALAENPLIASLRARGLLPPPVTSTPPTPTNLPFIL
PGQAGYATPVAMPQLSTLSETKINVQMTSASIKIPRPNLIATLYEDKPNRCGTCGRRFQS
DDQGKERKARHLDWHFKTNQRMTEATKRGQSRSWYLDEREWINSLECDDDIGPTNEGTTS
INGSATDAAAAAAKKTPQTQWIHAPNDATLRSVPCPICQEQFESTWSEEAQDWIWQDATK
VGSRIYHASCYSELTKDGTVTGRGTPVGRTGSRTPDSVLGKRKAEEPENATASVRIKTEP
AS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaggactggcatctgatgaagtcgcggaagattacaagaactccctcgaggac
ctaacaggaaacgataaattccaaattagcaatcttactgtgatcgctaaggaaaacaca
gaacatgcgatggccatctcccgagtattggagaatcatatccgaacgactcccccagcc
cagaagctcccggctctctatgtagttgattcagttgtgaaaaatgtaggaacgccttac
accctatttttgggccgcaacctttatcagacattcatgaacgcatatactcttgtcgac
tctcagacccggaaaaaactggatgaaatgttgaaaacttggaaagagcctgttcccggc
tccctggacactagacctgtgtttcctgttgagataactcgcagtattgagaatgctctg
atcaaagccagaacagctgcccttcaaaaccagcaggcgagaagccagcaggatcttctc
ggccggaatcgtggagttgttacgcctccgacttcgaccacctggcaacatactccaact
ccgccgcaagttgcttcacgatatgcgcaatcatccaatcaaaatgctcctccgcagcac
ccaagtaatggacagctctatgtaagcgctcaatgcctcccgattgcgctggctgttctt
ctactaacgccaacccagcagtcccagccatatggacacccagtccaagaacctgttgat
cttggcgcattacaccgtgatatagataatctgatctcaaattctcgagttgacttcgca
aataatccccttgacccttcaattcagcaacggctaaaagcccttctagacctccagaat
atcctgcagcaacaaaaactgcctcaagatcagttgagacttattcgagaccaggtatct
cagctttcaccaccatcccaaccgcctccacgagctgttccaactccaccggtgcaatcg
gtgcaaccaatgcaacagagccagacatcgcagccaaaccttcaagccctgctgaatccg
aacacgatcgcagagctcttaaaagtgagaacaagccaacaaagtctcactccaccgccg
ccaccgcatatcccctcatttcttcaacaagcagcaactagcacgccacctcctccgcct
ccttctacagcacctgccctagcagaaaatccattgatcgcctctcttagagcccgaggg
ttgcttcctccccctgtgacatctactcctccaacacccacgaatcttccgtttattctc
cctggacaagcgggatatgcaaccccggttgccatgcctcaactatccaccctatccgaa
accaaaatcaatgtccaaatgacctcagcgtctatcaaaataccaagaccgaatctaatt
gcaactctttacgaagacaagccaaacagatgtggcacatgtggccgacgctttcaatcg
gatgatcaagggaaggaaagaaaagcacgccatctggactggcatttcaaaaccaaccaa
cgtatgactgaagctaccaagcgcgggcaaagccgaagctggtatttggatgaacgggaa
tggataaactcactagaatgcgacgacgacatcggcccaactaatgaaggcacaacttcc
attaacggatcggcaaccgacgctgccgcagcggctgcaaagaagacgccacaaacgcaa
tggatccacgcgccaaatgacgcaacgctccgaagcgtgccgtgccccatctgccaggaa
cagttcgaatcgacgtggtctgaagaagcgcaggattggatttggcaggatgctaccaag
gtgggcagtcggatatatcatgctagttgctattcggagctcacgaaagatggcacggtg
acggggcggggaacgcccgtgggtagaactgggagtcggacgcctgactcggttttgggg
aagaggaaggcggaagaaccagaaaatgccacagctagtgttagaataaaaactgaacct
gcatcctga
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