Paracoccidioides lutzii Pb01: PAAG_08361
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Entry
PAAG_08361 CDS
T02230
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
pbl
Paracoccidioides lutzii Pb01
Pathway
pbl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PAAG_08361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbl03019
]
PAAG_08361
Messenger RNA biogenesis [BR:
pbl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
PAAG_08361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_22
TPR_2
TPR_19
TPR_1
TPR_CcmH_CycH
TPR_8
TPR_16
TPR_12
TPR_14
TPR_17
TPR_11
ARM_TT21_5th
TPR_Slam
ARM_TT21_N
ANAPC3
BTAD
DUF5588
PknG_TPR
RPN7
Motif
Other DBs
NCBI-GeneID:
9092952
NCBI-ProteinID:
XP_002789765
UniProt:
C1HC70
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MSTKAALKSIRTSLDFGDFEQAAGKARELCDKEPKNYYAHVFLGLALYKLNDIEGAETSY
RKATSTKDDDRTAWQGLLTLYESQGGKSLDQYRKAVTRLCQILSAADEKVKCQAAVQKYV
TLARKLGSKLQYKQALELQLPTSFLYDILEGTVPHPSQTYLRIIELCEAEEKEFINKEIG
ERRTRLGARIDQVTLEVKREAFQRSDLDNFYREIINWSHDDEVRRNYEEKLLQRAYDFLQ
VLPTGKKNEKREEVLRLAREMVIIKHPFLLAWKIVLEWRDVDDLAELDLNMLQGFLTLFP
EEGLSKVLSGFFESDISPFPKTLESDEEKQDDLDKTDSNEPNSPITSGDRLLLMAEGLEQ
SPDSIIAHRIMGQFYLSLDEFQTTVDVSRRGIAVITDVQRTTGLKLRNVADAVNITLANA
LITYQSPKNHPEAKQIFEDILKRRPTFTSCLLGIGLILEEDQDYTSAVEFLEQASERDPT
NIKVKSELFWCKTHNGELQLGLDGLEETLAMIKSTGTRNQALKAEILYRIGYCQWELDPS
PAARKDRTKAYASFLGSIQSNMNYAPAYSSLGIYYADYKKDQQRARRCFHKAFELSPAEV
DSAERLARDFADQGAWDLVEAISQRIVDSGRAKPAPGSKRKGHSWPYSALGVVEISRQQY
QKSIVAFQSALRISPFDYQSWVGLAESYHNSGRYIAATKAFEHAEALEMNLPISERGQVW
FAKYMLANVKRELKEYNEAITRYETVLKIKPDEFGVSIALLQTLTENAWKCVTLGLFGEA
ADCARKAIGTGISIAKKHPDVFNLWKLIADAFSTFSWIRGKASCMPITEYKKFIESQTDV
ASFELLADEDGVKTDFVSLLTKSSSGDGFSPNICIHAAILAHKRAVSISACDKHAQAIAW
YNLGWAEYRAYVCLEDDVKSKRNKPFLKTAMRCFKRAIELEAGNSEFWNALGVVTTFLSP
KVAQHSFVRSLHLNDRSPQVWTNLGALYLLHNDHELANEAFTRAQSTDPDFAHPWLGQGL
LALLFGDITEARELFTHAFELGNSALTFPKRQYAVSVFDYLNSDSTINVELQQLIQPLLA
LHQLRTQSPSNLPFQHLSALLAERMGSYTAANSSLENVCTALETEYESSESTSSLSRFVQ
AKADAARVQLALMDYKAAAESAETALSLSSEGDLEEFYPELNQKLQLSSHLTAGLAYFYL
EDMDRAIDMFRDALQEAKSSPDVVCLLAQVLWAKGGEEERDAARVQLLDCIEKHPTHVGA
VTLLGVIALLDADEDAIKAVQSDLQEMRISDVGIHDRVKVTKLLAGIVSLGLANESDRTK
EIRQCQEAKTSIMLAPYQPQGWAALSAASSEPYPAEMVLQTAIQNIPPKGTLDASELCKY
YAHSGHRDATARAIMIAPWVSDGWKELFHCISES
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaaaggcagccctgaagtctattcggacctctttggattttggagacttcgag
caggccgctgggaaagcgagagagctttgcgataaagagccgaagaactattatgcacat
gtgttcctcggacttgcgctttataaattaaatgatatcgagggggcggagacttcatat
cgaaaggcaacttcaactaaggacgatgacagaacagcttggcagggcttactgacgttg
tatgaaagccaaggtgggaaatctttggatcagtatcgcaaagcggtgacaagactatgt
cagatactatctgctgccgatgagaaagttaaatgccaagctgccgttcagaaatatgtt
acgctggctaggaaacttggttctaagttgcaatacaagcaggctttagagcttcaacta
cccactagctttctgtatgatattctcgagggcaccgtccctcatccatcccagacatat
cttcgtataatagagttatgcgaagccgaggaaaaggagtttatcaacaaagaaattggt
gagaggcggactagattaggtgcccgaattgaccaggtgactctggaagtaaaacgtgag
gccttccaacgtagtgacttggataatttctaccgtgagattatcaattggtcccatgat
gatgaagttcgccggaactatgaggaaaagctgttgcagcgggcttatgactttcttcaa
gtgctccccactgggaagaaaaatgaaaagcgtgaagaagtactgcgtcttgcgcgggaa
atggtcattatcaagcatccatttcttcttgcttggaagattgttttggagtggcgagac
gtagatgatctcgcagagttagatctcaacatgctacagggttttctaacattattccct
gaggagggtttaagcaaagtactaagtggattttttgaaagtgatatctctccgtttccc
aaaacactggagtcggatgaagagaaacaggatgacctagacaaaaccgactcaaacgaa
cccaacagtccaattacttctggagaccgtctgctattaatggcagagggattagaacaa
agtcctgattcaattattgctcacaggattatggggcagttctatctgtcgctagacgag
ttccagacaaccgttgacgtctctcgcagaggtatagctgtcattacagatgttcaacgc
acaactggactaaaactgcgcaatgtcgccgacgcagtgaatattactcttgccaacgct
ttaatcacataccaatcaccaaagaaccacccggaagcaaaacagatatttgaagatata
ttgaagcgcagacctacgttcactagttgtcttcttgggattggcctaattctagaagag
gatcaggattacaccagcgcagtggagtttttagaacaggcatcggaacgtgatcctact
aatattaaagtaaaaagtgaattgttctggtgcaaaactcataatggagagctccagcta
ggtttagatggtttggaagaaactctagccatgatcaaatcaacaggtacgcgaaaccag
gctctcaaagcggagattttataccggatcggatattgtcaatgggaactagatccttca
ccggcggctaggaaagatcgcaccaaggcctacgccagttttctcggttccatacagtct
aatatgaattacgcaccagcttacagcagccttggaatatattatgcagactacaaaaag
gaccaacaacgagcgcgccgttgcttccataaagctttcgagctttcccctgccgaggta
gattctgcagagcgtctagccagggattttgcagaccagggagcctgggatcttgtcgaa
gcaatctctcaaagaattgtggattcaggaagagcgaaacctgcaccgggttcgaaacgc
aagggccatagctggccgtattcagcccttggtgtggtagaaataagcagacaacaatat
cagaaaagtatagtggcattccagtcagcgttacgaatatccccattcgattaccagtcc
tgggtcgggctggctgaaagctaccacaactctggtcgttatatcgcagccacgaaggcg
tttgagcatgcagaggcattagagatgaatcttccaatatctgagaggggtcaagtttgg
tttgcgaagtatatgcttgcaaacgtgaagagagagctaaaggaatacaatgaagcaatt
acgagatatgaaacagttctgaaaataaagcctgacgaatttggtgtctcgatcgcactt
ctgcaaactcttactgaaaatgcgtggaagtgtgtcacgttggggttgttcggtgaagcg
gctgactgtgcgaggaaggctatcggaacaggcatatcaattgcaaagaaacatcctgac
gtgttcaacttatggaagttaattgccgatgcgttctccaccttctcctggattcgggga
aaggcatcctgcatgcctatcacagagtacaaaaagtttattgaaagtcaaactgatgtg
gcatcttttgagttgctcgcagatgaggatggtgtgaagacagactttgtttcactactt
acaaagtcgagttccggagatggtttttcaccaaacatatgtatccacgctgcgattctt
gctcacaaacgtgccgtgtccatatccgcttgtgacaaacacgcacaggcaatagcatgg
tataatctcggatgggcagaatatcgtgcatacgtatgcttggaagatgatgttaagtcc
aaaagaaacaaacctttcctcaaaacagccatgcggtgtttcaaacgagcaatcgaactt
gaggctggcaattctgagttttggaatgcgcttggtgtagtgacaacgttccttagcccg
aaagtcgcccaacattcgtttgtcagaagtctccatttaaatgatagaagtccacaagtg
tggacgaatttaggtgcgttgtaccttcttcataatgaccatgagcttgcgaacgaggcg
tttacgagggctcagtctacggatccggactttgcccatccgtggctcggacagggcttg
cttgcactactatttggagacataacggaggccagagaactctttacgcacgcctttgaa
ctaggaaattcagcattgacgttcccaaaaaggcagtatgcagtatcagtctttgattac
ctaaactccgattccacgataaatgtagaacttcaacaactcattcaaccccttcttgca
ctccaccaactccgtacccaatcaccctccaacctcccatttcaacatctttcagccctg
ttggctgagagaatgggaagctataccgctgctaattcgagccttgaaaatgtgtgcacc
gctttggaaacagagtatgaatcatcagagtcaacgtcgtcattatcacgttttgttcag
gcaaaagcagatgcagctcgggtgcagctagctctgatggactacaaagctgcagctgaa
agtgctgagactgctctaagcttatcatctgagggtgacttagaagagttttaccctgaa
cttaatcaaaagctacaactctcatcacatctgacagccggactggcttacttctatctc
gaagacatggacagggcaattgacatgttccgcgatgctttgcaggaagcaaagagctca
cctgatgtagtatgtttactggcacaagtcttgtgggctaagggtggggaagaggagaga
gacgcagctcgggtgcaacttttggattgtatcgaaaagcaccctacacatgttggcgcg
gttactcttttgggtgtcatagctttattggatgctgatgaggatgcaatcaaagcagtc
caatctgacttgcaggagatgcgaataagtgatgttggcatccacgatcgggtgaaagtc
actaaactcctcgcaggaattgtcagtcttggacttgccaacgagtctgatagaacaaaa
gagataagacagtgtcaagaagctaaaacatctataatgcttgcgccataccagccgcag
ggatgggctgcactgtccgcagcgtcttctgagccatacccagctgaaatggtattacaa
actgcaatccaaaatataccccccaagggaacacttgatgcatcggagctttgtaaatac
tacgcccattctggtcatagagatgctacagccagagccataatgatagctccttgggta
tcagatggctggaaagaacttttccactgtatatcagagtcataa
DBGET
integrated database retrieval system
