Paracoccidioides lutzii Pb01: PAAG_08499
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Entry
PAAG_08499 CDS
T02230
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
pbl
Paracoccidioides lutzii Pb01
Brite
KEGG Orthology (KO) [BR:
pbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pbl03012
]
PAAG_08499
Enzymes [BR:
pbl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PAAG_08499
Translation factors [BR:
pbl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PAAG_08499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_C
DSRM_DHX29
AAA_22
HA2_N
nSTAND3
Motif
Other DBs
NCBI-GeneID:
9092810
NCBI-ProteinID:
XP_015701193
UniProt:
C1HCK8
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MAPNRKKKKPASNPSRGFTTVSVPSKTKATGSTTSLSSTAPVGHQEASETPTEPPSQASI
GSQPQPSLQELSPDELQKHLEDAELQFLVEKYGVKSKNDASRQVLKLETEKRILRPQASI
LNVTDWLSPYILNKINEMEKMEVKKSVEQASRPEIEEGQILSSGEDLCIKLWTLRHTLLG
LNFAPEDVEKTLKNSLQFCFNDPAVSKDLVWGLDQSIEWLARHCDEKNLPQYDKPKSNHL
NIKREASSFEKGKLGSNPSSTGYNTPSDTRSSPRKMEGKTLLNQSSYNSEESDTNPDSLV
PKYIDLHTQLYMQQPDLFNQTRKGKTKVISSSTSGDDTTQHLTAELKRNLAKIENDILFD
HGRAEELWGEKLTELREDTAKHLRNAGEERPLVTPPTKPQESKVLDVSDTLIEPILSDSN
DNDDIFGNLFSTDADGPSAVVSNSNWNGNSSIRSRDFGKPAGMNPRRILEEACRARDSGW
NIVYRDVSSTPFSHRKEVEIRWSKAQDPPPPVRLDDISYRGSSHSVCASMVSISTPTALQ
AESYISTVALFIIFSHSQKEGKVYMRLPAVWRDLWDEFVTVKKNQEDQADKDVLRSLQKV
VQEKMETFEDDIVLLDNFRKRNGEINPPLLQGASQSNQATKPAEQFRKLWTDRSSTFSFA
VMESSRKKLPIWKFKDQILETLSTNQAIIICSETGSGKSTQIPSFILENELLSGRNCKIY
VTEPRRISAISLAKRVSEELGEDNKAVGTSRSLVGYAIRLESKISSSTRLTFATTGVVVR
MLKRPNDFQDITHLVLDEVHERTIDSDFLLIILRRLMQDRPDLKLVLMSATVDAERFSKY
FHGAPVLNIPGRMFPVEVKYLEDAIEATEYHPIDDQLSSAAYDSDDPLDGNAENPMVDFA
SSLAGYSKQTRDTVLGFNEYRLDYKLIVNLLLAIATKKEFERYSKAILVFMPGMAEIRRL
NDEISSEPLFNNHKWIIHALHSSMASEDQESAFLIPPKGVRKIVIATNIAETGITIPDIT
AVIDTGKDKVMRFNEKSQLSKLVESFISRANAKQRRGRAGRVQSGLCFHLFTKYRHDLLL
AEQQTPEMLRLSLQELVLWVKICNLGDVEQTLSEAIDPPSSKNIRRAIEALKEVKALTSS
ENLTALGRQLAKLPLDVLLGKLIIYGAFFKCLDSAVSIAAILSSKSPFVNTVGSNSQREL
AKLSFKRGNSDLLTIYNVYLAWKRHRSTPGMSEYAFCRKNFLSPQTLLNIEDVKLQLLVL
IVDAGLIILDSAEQESLKRARFTDRQRQFFTVPKWADINSANDITINSVIAWSFYPKLLS
RDGKGWRNVANNQTVSLHVSSVNQRLDAPLKWLSFYHIMQSRSRCLHARETSPVEDFAIS
LLCGDVEFKLFAGIIALDGARIRFSVKDWKSMLAIKALSTRIRNILSTNIRNPQKELTPN
EQGWIDLWQQVFSEAWERELAK
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggccccgaacaggaagaagaagaaacccgcttcgaacccatccagaggattcacaaca
gtctctgtcccgtcaaagacaaaggcgactggatctacaacatcactgtcctcgactgcg
ccagtgggacaccaggaagcgtcagaaaccccgactgaaccaccatcacaagcttccatt
gggtcacagcctcagccttcgcttcaggaattgtctccagatgagctccaaaaacatctt
gaggatgctgaactgcaatttctagttgaaaaatatggcgtcaagtccaagaatgatgct
tctcgccaagttcttaagctggagactgagaagcgtatcctgcgaccccaagcatcaatt
ctaaatgtgactgactggttgtccccttacattttgaataaaattaatgagatggagaaa
atggaggtaaagaagtccgtcgagcaagcttccagacccgaaatagaggagggccagatt
ctatcttcgggggaggacctctgtataaaactttggacccttcgacacactcttctaggt
ttgaattttgcgccggaggatgttgaaaaaaccctgaaaaacagcctacaattttgtttc
aacgatccagcagttagtaaggatcttgtatggggcttagatcaatctatagaatggctt
gccaggcattgcgacgagaagaacctaccccaatatgacaagcctaagtccaaccactta
aatatcaaaagggaagcttcctcatttgagaagggtaaactgggttcaaatccctcaagc
acgggttataacacccctagcgatactcgttcaagtccaaggaaaatggaaggcaaaaca
ctcctgaatcagtcaagctacaactctgaagagtctgataccaacccagactctctagtt
cctaaatatattgatctccatacacagctctacatgcaacagccagatttgtttaatcag
acgaggaagggaaaaacaaaagtaatttcgtcatccacttcaggggatgacacaacgcag
caccttacagccgagttgaaaagaaacctagcaaaaatcgaaaacgacattctattcgat
cacggccgggctgaagagctatggggggaaaagctaactgagctaagggaagatactgcg
aaacacctacggaacgcaggtgaagagcgtccactagtgacgcctcctaccaagccacag
gaatctaaagttctagacgtttctgatacgttgatagagccaatactctctgattcgaac
gataacgacgatatttttggaaacttatttagcactgatgcagacgggccttctgcagtg
gtttcgaattctaattggaatggcaattcatcaattagaagcagagattttggcaaacca
gcaggaatgaatccgcgacggattctcgaagaagcttgccgggcaagggactctggatgg
aacatagtgtatagagatgtttcctcaacacccttttctcatcgcaaggaagttgaaatt
agatggtcaaaagcacaagacccgccacctccagtgcgcttggacgacatatcgtacaga
ggtagctcacattcagtatgtgcgtcaatggtgtcgatttcaactcctaccgccctgcag
gctgagtcctacatttcgacggtggctcttttcatcatattttcccattctcagaaagag
ggaaaggtttacatgagactgcctgctgtatggcgagatctgtgggatgaattcgttaca
gttaagaagaatcaggaagatcaagccgacaaggatgttctgagatctcttcaaaaagta
gtccaagaaaaaatggaaacatttgaggatgatattgtgcttttggataatttccgaaaa
cggaacggtgaaatcaacccccccctcctgcaaggggccagtcagtcaaatcaagctacg
aagcctgcagaacagttccgaaagctctggacggacagatcctcaaccttctctttcgca
gttatggagtcttcaagaaaaaaactacctatatggaaattcaaagaccagatcttagaa
accctttctaccaaccaagccataattatctgcagtgaaacggggagcgggaagagtacc
caaattccttcgttcattctggagaatgagctgttgtcaggccgaaattgcaaaatttac
gttacagagccgcgacgcatttcagccatatcattagccaaacgagtgagcgaggaactt
ggagaggataacaaagcagtaggaaccagtcgctccctcgttggatatgccattagatta
gaaagtaaaatttcaagctcaacacgactaacatttgcgacaacaggggtagttgtaagg
atgttgaagcgacctaacgatttccaggatattacccatctagtattagacgaggtgcat
gaacgtacaatcgacagtgattttcttttaattatccttcgcaggttgatgcaagacagg
ccagatctgaagcttgtgttgatgtcggccaccgttgacgcggaacgattttccaaatat
ttccatggtgcccctgtcttgaatatccctggtcggatgtttcctgtggaggttaagtac
cttgaggacgcaattgaagctacagagtaccatccaatcgacgatcagctttcttcagcc
gcatatgacagcgatgacccattagacgggaatgccgaaaatcctatggtagattttgca
tcctctctggcaggttacagcaaacaaacccgagacactgtactcggatttaacgaatac
cgactagactataaactgatagtaaacctccttttggcgattgcaaccaagaaagaattt
gagcggtatagcaaggccatcctcgtattcatgccggggatggcagaaataaggcggctc
aatgacgaaatctcatctgaaccgctgttcaacaaccataagtggattattcacgctcta
cactcttccatggctagcgaggatcaagaaagcgcttttctcatccctccaaagggcgta
agaaagatcgtaattgccactaatatcgctgaaacaggcattacaattccagatattaca
gcagtcattgatacaggcaaagacaaggttatgcgattcaacgagaagagtcagctatcc
aaattagtagaatctttcatatcgcgggctaatgccaaacaacgtcgaggccgcgccggt
cgagtacagagtggactttgctttcatttattcacgaagtatcgccatgatctattgctt
gccgaacagcaaacaccagaaatgctccggctttcgttacaagaactcgtcctctgggtg
aaaatatgtaatctaggagacgtcgaacaaacactttcagaagccatcgacccgccatcg
tccaagaacatacgccgtgccattgaggcacttaaagaggtcaaagcattgacgagtagt
gagaatttgactgcgcttgggagacaacttgcgaagttacctttagatgtccttctcgga
aaacttattatctatggggctttttttaaatgcttagatagcgcagtcagcatcgccgcg
atcctgtcatcgaaatctccattcgtcaacactgtcggttctaactcccaaagggaactt
gcgaagttgtcatttaaacggggaaactcggatcttcttaccatttacaatgtgtattta
gcatggaaacgccacagaagtactccaggaatgagcgaatacgcgttttgcaggaaaaac
ttcctgagcccacagacgttgctcaacatcgaagacgtaaaattgcagctcttagtattg
attgttgatgctggactaatcatactagattctgctgaacaggaatctctgaaaagagca
cgctttactgaccgccaacgccaattttttaccgtgcccaaatgggcagatatcaacagt
gcgaatgacataaccataaattcagtgattgcatggagcttttatcccaaactactcagt
cgcgacgggaaaggctggaggaatgtggccaataatcaaacggtgtcgctccacgtatcc
tcagtgaaccaacggctcgatgcccccttgaaatggctttccttttatcacatcatgcaa
tctcgcagtcgatgtttacatgctcgtgaaacgagcccggtggaggactttgcaatttca
ttgctgtgtggagatgtcgagttcaagctattcgccggcatcatcgccttggacggcgcc
cgcatcaggttctccgtcaaggattggaaatcaatgctagctataaaggcactcagcact
cgaatacgaaatattctatccaccaatattcgtaacccgcaaaaggaattgacacccaac
gaacagggttggattgatttgtggcaacaggtattttcagaagcgtgggaacgggagctt
gcgaagtag
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integrated database retrieval system
