Stutzerimonas balearica: CL52_00530
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Entry
CL52_00530 CDS
T03573
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbm
Stutzerimonas balearica
Pathway
pbm03420
Nucleotide excision repair
pbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CL52_00530 (uvrD)
03430 Mismatch repair
CL52_00530 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_00530 (uvrD)
Enzymes [BR:
pbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CL52_00530 (uvrD)
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CL52_00530 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CL52_00530 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJE13603
UniProt:
A0A8D3XXS6
LinkDB
All DBs
Position
114663..116852
Genome browser
AA seq
729 aa
AA seq
DB search
MHDDISHLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLNQVERASLYSIL
AVTFTNKAAAEMRQRIEQLLHVNPQGMWVGTFHGLAHRLLRAHWREAKLAENFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPQNIQAGGDLFLATQLKIYQAYE
EACARAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHILVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGARIENLQQFGDDFQDAEIIRLEQNYRSTACILKAANALIA
NNQGRMGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINLPARGI
GEKTVDSLRQLAREQGLSLWAALHQAVGTKAVSGRAASALNAFVELIDSLALKVEKLPLH
SMAQAVIEDSGLLAYHRDEKGDKAQARVENLEELVSAARAFDSYNEEDDSVQSPLAAFLD
HASLEAGEQQAGEHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEER
RLAYVGITRAMQQLVITYAETRRLHGSETYNKVSRFVREIPPALIQEVRLNNTVSRTFAG
RSMSGASLFAGAGVPETPFALGQRVRHSLFGEGTILNFEGAGAQARVQVNFESEGSKWLM
LSYAKLEAL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgatatctcccacctgctcaactccctcaacgatgcccagcgccaggccgta
gccgcgcccctgggacgccaactggtccttgccggcgccggctcgggcaagacccgggtg
ctggtgcaccgcatcgcttggctgaaccaggtcgagcgcgcctcgctgtactcgatcctg
gcggtgacgttcaccaacaaggccgccgccgagatgcgccagcgcatcgagcagctgctg
cacgtcaacccgcaaggcatgtgggtcggcaccttccacggcctggcccaccgcctgctg
cgcgcgcactggcgcgaggccaagctggccgagaacttccagatcctcgattccgacgac
cagcagcgcctggtcaagcgggtgatccgcgagctggggctggatgagcagcgctggccg
gcgcgccaggcgcagtggtggatcaacgcgcagaaggacgagggcctgcgcccgcagaac
atccaggccggtggcgatctgttcctcgccacccagctgaagatctaccaggcctacgag
gaggcctgcgcacgtgccggggtgatcgatttctccgagctgctgctgcgcgcgctggac
ctgtggcgcgatcatccgggcctgctcgagcactatcagcggcgcttccggcacatcctc
gtcgacgagttccaggacaccaacgccgtgcagtacgcctggctgcggctgctggccaag
ggcggcgaaagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggt
gcgcggatcgaaaacctgcagcagttcggcgacgatttccaggatgccgagatcatccgc
ctggagcagaactaccgctccaccgcctgcatcctcaaggcggccaacgcgctgatcgcc
aacaaccaggggcgcatgggcaaggagctgtggacctccggttgcgagggcgagccgatc
agcctgtacgccgcgttcaacgagcatgacgaggcgcgttacgtcgtcgagagcatcgag
aaggccatccgcgacggcatgagccgcagcgagatcgccattctctaccgctccaacgcg
caatcgcgggtgctcgaggaagcgctgctgcgcgagaagattccctaccgcatctacggt
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgatc
cagacccgcgacaacgacgcggcgctggaacgggtgatcaacctgcccgcgcgcggcatt
ggcgagaagaccgtcgacagcctgcgccagctggcgcgcgagcagggcctgtcattgtgg
gcggcgctgcatcaggcggtcggcaccaaggcggtctccgggcgcgcggcgagtgcgctg
aacgcctttgtcgagctgatcgacagcctggcgctgaaggtcgagaagctgcccctgcac
agcatggcccaggcggtgatcgaggattccgggctgctcgcctatcaccgcgacgaaaag
ggcgacaaggcccaggcgcgggtggaaaacctcgaggagctggtgtccgccgcgcgcgcc
ttcgacagctacaacgaggaggacgacagcgtgcagtcgccgctggcggccttcctcgac
cacgcctcgctggaggccggcgagcagcaggccggcgagcacgaggacagcgtgcagctg
atgacgctgcacagcgccaagggcctggagtttccgctggtgttcctggtcggcatggaa
gaggggctgttcccgcacaagatgagcctggaggagtccggccgtctggaagaggagcgc
cgcctggcctatgtcggcatcacccgcgccatgcagcagctggtgatcacctacgccgag
acccgtcgtctgcacggcagcgagacctacaacaaggtctcgcgcttcgtgcgggagatc
ccgccggcgctgattcaggaagtgcggctgaacaacacggtcagccgcacctttgccggg
cgcagcatgagcggcgcctcgctgttcgccggcgccggcgtgccggaaaccccctttgcc
ctcggccagcgcgtgcgccattcgctgttcggcgaaggcaccatcctcaacttcgaaggc
gccggcgcccaggcccgggtgcaggtgaacttcgagagcgaaggcagcaagtggctgatg
ctcagctacgccaagctcgaagccctctga
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