Stutzerimonas balearica: CL52_03065
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Entry
CL52_03065 CDS
T03573
Name
(GenBank) RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbm
Stutzerimonas balearica
Pathway
pbm03420
Nucleotide excision repair
pbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CL52_03065
03430 Mismatch repair
CL52_03065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_03065
Enzymes [BR:
pbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CL52_03065
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CL52_03065
MMR (mismatch excision repair)
Other MMR factors
CL52_03065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
Viral_helicase1
UvrD_C
AAA_19
UvrD_C_2
KdpD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJE14065
UniProt:
A0A8D4C1B6
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All DBs
Position
662590..663774
Genome browser
AA seq
394 aa
AA seq
DB search
MPNELWVAGAGSGKTHKIITEAIETIKAGGRVLVVTYTTNNQAELRSRFVELYGASSEHF
VVKGLFSFYLEDMVRPYQSEVFPDRITTISFTENNPHLISGTTYYIEGRAEKSEDGTINP
LHYLTPCKTKAYSGFLAKLATLIAKLSKNAPAKRLKEIYQRVYFDEVQDLVGWDYDVIKS
LNKVMVDSICCVGDFRQTIYTTTFGHKAPQTPQQKVDYFVGKMKFEKHSMPKNRRCIQEI
CDLSDTIHLGLYDKTVTGVEKVPDEISHHHGTFIVKQSQVSDYLAAFQPQVLRWSSTTGT
GYLPGNLICYTFGSCKGLGFDRVLVIPSDKHLKFIGGNAKVFDKDKTEESRNKLYVAITR
ARYSLAFLVEDKKVKGLPYPIWDGSGALNAVIEK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttgcctaacgaactctgggtcgcaggcgccggatcagggaaaacgcacaagatcattact
gaagccattgagaccatcaaggctggtggacgtgtgcttgtagtcacctatacaaccaat
aatcaggcagagttgcgctctcgttttgttgagttgtacggtgctagcagtgagcacttc
gtcgtcaaggggctgttctctttttacctggaagatatggtgcgtccctatcagagcgag
gtatttccagatcggatcacgactatctcgttcactgagaacaaccctcacttaatatcg
ggtacaacctactacattgaaggcagagctgaaaaatcggaagatggcacgatcaatcca
ctgcattacctgacgccctgcaaaacaaaggcgtactccgggtttttggcaaagcttgcg
accctcattgcgaaactatccaaaaatgcccctgccaagcggttgaaggagatttatcaa
agggtctattttgatgaagtgcaggatttggtcggttgggactacgacgtgatcaaatca
ctcaacaaggtcatggtcgactcgatctgttgtgtgggcgactttcgacagacaatctac
acaacgacgttcggccataaggctccgcagacgcctcaacagaaggtcgattacttcgtc
gggaaaatgaagttcgaaaagcattcgatgccgaagaatcgcaggtgcatacaagaaatc
tgcgacctctccgacacgatccacctggggctgtatgacaagacggtaacaggtgtcgag
aaagtgccagacgaaatatcgcatcaccatggcaccttcatagtgaaacaatctcaggtg
agcgattacttggcagcgtttcagcctcaagtactgcgctggtcgtccaccaccggcact
ggatacctaccgggtaaccttatctgttatacgttcggttcctgcaaaggcttaggcttt
gatcgagtgcttgtgatcccgtcagataaacatctgaagttcattggcggaaatgccaaa
gtgttcgacaaggataagacggaggagtcgcgaaacaagctatacgtcgcgattacccgc
gcgcgctatagcctggccttcctcgtcgaggataagaaggtgaaagggctcccttacccc
atatgggatggctctggcgcgctcaatgcagtgatcgaaaagtga
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