Stutzerimonas balearica: CL52_04525
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Entry
CL52_04525 CDS
T03573
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbm
Stutzerimonas balearica
Pathway
pbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CL52_04525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbm03019
]
CL52_04525
03016 Transfer RNA biogenesis [BR:
pbm03016
]
CL52_04525
Enzymes [BR:
pbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CL52_04525
Messenger RNA biogenesis [BR:
pbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CL52_04525
Transfer RNA biogenesis [BR:
pbm03016
]
Prokaryotic type
tRNA degradation factors
CL52_04525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_PNO1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
AJE14338
UniProt:
A0A8D3XZ80
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All DBs
Position
979479..981587
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AA seq
702 aa
AA seq
DB search
MNPVTKKFQFGQSTVTLETGRIARQATGAVLVTVDDDVAVLVTVVGAKNADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIASMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTEEAVLMVESEAQELTEDQMLGAVLFAHQEFQAVIQAVKEFAAEAGKPKWEWSAPVEN
TALLSAIKAEFGEAISEAYTITIKQQRYSRLDQLREQVIARFATEGEGQPSVGEVKEAFG
LLEYRTVRENIVNGKPRIDGRDTRTVRPLKIEVGVLPKTHGSALFTRGETQALVVATLGT
ARDAQLLDTLEGEKKDAFMLHYNFPPFSVGECGRMGSAGRREIGHGRLARRGVAAMLPSA
DEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVL
TDILGDEDHLGDMDFKVAGTANGVTALQMDIKIQGITEEIMEIALGQALEARLNILGQMN
QVIAQSRSELSANAPTMLAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIF
GETKEAAEAAKQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISQISDQR
IEKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtaaccaagaaatttcagttcggtcagtcgaccgtaaccctggagactggc
cgtatcgcccgtcaggccaccggcgccgtgctggtcaccgtcgatgacgacgtggctgtg
ctggtcaccgtggtaggtgcgaagaatgccgatccgagcaagggcttcttcccgctgtcg
gtccactatcaggaaaaaacctacgcagccggcaagattcccggcggcttcttcaagcgt
gaagggcgtccgtcggaaaaggaaaccctgacttcgcgcctgatcgaccggccgattcgc
ccgctgttcccggaaggcttcatgaacgaagtgcaggtagtctgcaccgtcgtttccacc
agcaagaagacggatccggacatcgcatcgatgatcggtacttctgctgcgctggccatt
tcgggcatccccttcgacggtccgatcggcgccgcccgcgtggcgttccacgagagcacc
ggctacctgctgaacccgacctacgagcagctcaaggcctccagcctcgacatggtcgtg
gcgggtaccgaggaagcggtgctgatggtcgagtccgaggcccaggagctgaccgaagac
cagatgctcggcgccgtgctgttcgcccatcaggagttccaggccgtcatccaggctgtc
aaggaattcgccgccgaggctggcaagccgaagtgggagtggagtgccccggtcgagaac
accgcgctgctgtcggccatcaaggccgagttcggcgaggcgatttccgaggcctacacc
atcaccatcaagcagcagcgttacagccgtctggatcagctgcgcgagcaggtcatcgcc
cgcttcgccaccgagggtgaaggccagccgagcgtcggcgaggtcaaggaggcgttcggc
ctgctggagtaccgcaccgttcgcgagaacatcgtaaacggcaaaccgcgtatcgatggc
cgtgacacccgtaccgtgcgcccgctgaaaatcgaggtcggggtactgcccaagacccac
ggttcggccctgttcacccgtggtgaaacccaggcgctggttgttgcgaccttgggtacc
gcgcgcgatgcgcagctgctcgacacgctggaaggcgagaagaaagacgctttcatgctg
cactacaacttcccgccgttctccgtcggcgagtgtggtcgtatgggtagcgccggccgc
cgcgaaatcggccatggccgtctcgctcgtcgtggcgtcgccgccatgctgccgtcggcc
gatgagttcccctacaccattcgcgtggtatccgagatcaccgaatcgaacggttcgagt
tcgatggcttcggtgtgcggtgcctcgctggcgctgatggacgccggcgtgccaatgaag
gcgccggtagccggtatcgccatgggcctggtcaaggaaggtgacaagttcgccgtactg
accgacattctcggtgacgaagaccacctgggcgacatggacttcaaggttgccggcacc
gccaacggcgtaaccgcgctgcagatggacatcaagatccagggcattaccgaagagatc
atggagatcgctctggggcaggcgctggaagcacgcctgaacatccttggtcagatgaat
caggtcattgcccaatcgcgcagcgagctgtcggccaacgctccgaccatgctggcgatg
aagatcgaccaagacaagattcgcgacgtgatcggcaagggtggcgccaccattcgcgcc
atctgcgaagaaaccaaggcctcgatcgacatcgaagatgatggctcgatcaagatcttc
ggcgaaaccaaggaagcggcagaagcggccaagcagcgcgtgctgggcatcactgccgaa
gccgaaatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggcgccttc
gtcaacatcctgccgggcaaggacggtcttgtgcacatttcgcagatcagcgatcagcgc
atcgagaaagtcaccgacgtgctgaaggaaggccaggaagtcaaggtgctggtgcttgac
gtggacaaccgtggccgcatcaagctgtcgatcaaggacgtcgcggcagccgaagcttcg
ggcgtctga
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