Stutzerimonas balearica: CL52_07625
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Entry
CL52_07625 CDS
T03573
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pbm
Stutzerimonas balearica
Pathway
pbm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CL52_07625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbm03019
]
CL52_07625
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_07625
Enzymes [BR:
pbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CL52_07625
Messenger RNA biogenesis [BR:
pbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CL52_07625
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CL52_07625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HTH_20
Sigma70_r4_2
HTH_23
HTH_7
HTH_29
GerE
Motif
Other DBs
NCBI-ProteinID:
AJE14922
UniProt:
A0A8D3Y0R1
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All DBs
Position
1630169..1632295
Genome browser
AA seq
708 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQAAIIERVARGGDALVLMPTGGGKSLCYQVPALLRDGLA
VVVSPLIALMEDQVATLDELGVPAVALNSMLEADAQRDIAERIRRNEIKLLYLAPERLVQ
PRMLAFLQRLNIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPEVPRIALTATADKRT
REEIVRRLHLQDAERFLSSFDRPNIFYRILPKDQPRKQLMGFLAERRGDAGIVYCLSRKK
VEEVAEFLSAQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVFLKQMLANSEGDEQHKRVELHK
LDAMLALCEETRCRRQALLAYFDEVLAEPCGHCDNCVDGVQTWDATEPARQALSAIYRSG
QRYGVGHLVDILLGKDNEKIRSFGHQQLSVFGVGKTLSEGEWRTLFRQLVARGLADVDLE
GYGGLRLSESCRPLLRGEVRLELRREPAASKAPRSGASPASSLVRQEERETWEALRSLRR
KLAEEHGVPPYVIFPDATLLEMLRSGPRTLADMAGVSGVGARKLERYGQAFLDVLQGGAK
VERSAGDLRHELISLARSGMTPTQIARQLDCTEKNVYAMLAEAISAQQLSLEQALDLPEA
LLEEIQAAFLDGEGELPGVAEVAPLFTGRVPDAVLYCVRAALQAEFEL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacaacgcatcctcaaagacgtttttggctacgacgcctttcgcggc
aatcaggcggcgatcatcgagcgggtcgcccgtggcggcgacgccctggtgctgatgccg
accggcgggggcaagtcgctgtgctaccaggttccggcgctgttgcgtgacgggctggcc
gtggtggtctcgccgttgatcgcgttgatggaggatcaggtcgccacgctggatgaactc
ggcgtgccggcggtagcgctcaactccatgctcgaggccgacgcgcagcgtgatatcgcc
gagcgtattcgccgcaacgagatcaagttgctgtacctggcacccgagcgcctggtgcag
ccgcgcatgctggcctttctgcagcgactgaacattgcgctgttcgccatcgacgaagcg
cattgcgtgtcgcagtggggccacgatttccgccccgagtacctgcagcttggccagctt
gccgagctgtttcccgaggtgccgcgcattgcgctgacggccactgccgacaagcggacc
cgcgaggagatcgttcggcgcctgcatctgcaggatgccgagcgctttctgtccagcttc
gatcggccaaacatcttctaccgcatcctgcccaaggatcagccgcgcaagcagctgatg
ggctttctcgccgagcgccgcggcgatgccggcattgtctattgcctgtcgcgcaagaag
gtcgaggaggtcgccgagtttctttccgcccagggctttccggcgctgccttaccatgcg
gggctgcccaacgagttgcgcgcctatcaccagaagcgctttctcaatgaggaaggcctg
atcatggtggcaaccattgccttcggcatgggcatcgacaagcccaacgtgcgtttcgtc
gctcacctggacctgcccaagtcgctggaggcctattaccaggaaaccgggcgcgccggg
cgcgatggcctgccggccgatgcctggatggcctatggcctgcaggacgtggtctttctc
aaacagatgctggccaattccgaaggtgatgaacagcacaagcgcgtcgagctgcacaag
ctcgacgccatgctggcgttgtgcgaggagacccgctgccggcgacaggcactgctggcc
tatttcgacgaggtgctcgccgagccctgtggccattgcgacaactgcgtcgacggtgtg
cagacctgggatgccaccgagccggctcgtcaggcgctgtcggcgatctaccgcagcgga
cagcgttatggggttggccatctggtcgacatcctgcttggcaaggacaacgagaagatc
cgcagcttcggccatcagcagctctcggtgttcggcgtcggcaagacgctctccgaaggc
gaatggcgcacgctgtttcgtcagctggtcgcacgcggtctggcggacgtcgatctcgag
ggctacggcggtttgcgcctgagcgagagctgcaggccgttgctgcgtggcgaggtgcgc
ctggagctgcgccgtgaacccgctgcgagcaaggcgccgcgcagcggtgccagccccgcc
agcagccttgtccgccaggaggagcgcgagacctgggaagcgctgcgcagcttgcgtcgc
aaactggccgaagagcatggcgtgccgccttatgtgatttttccggatgcgacgctactg
gaaatgctgcgtagcggcccgcgcacgcttgccgacatggctggggtcagcggcgtcggt
gcgcgcaagctcgagcgctacggccaggcgtttctcgatgtgctgcagggcggtgccaag
gtcgagcgaagtgccggcgatctgcgccacgagctcatttcgctggctcgctccggcatg
acgccaacgcagatcgcgcggcagctcgactgcaccgagaagaatgtctacgccatgctg
gccgaagccatcagtgcgcagcagctgagcctggagcaggcgctcgacttgcccgaggcg
ctgctcgaggagatccaggcggcttttctcgacggcgaaggcgagcttcccggcgtcgcc
gaggtggccccgctattcaccggccgcgtgcccgatgcggtgctgtattgcgtgcgtgcg
gccctgcaggcggagttcgaactgtaa
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