Stutzerimonas balearica: CL52_12015
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Entry
CL52_12015 CDS
T03573
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbm
Stutzerimonas balearica
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbm03032
]
CL52_12015
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_12015
Enzymes [BR:
pbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CL52_12015
DNA replication proteins [BR:
pbm03032
]
Prokaryotic type
DNA Topoisomerases
CL52_12015
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CL52_12015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJE15721
UniProt:
A0A8D3Y2J7
LinkDB
All DBs
Position
complement(2616327..2618924)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASKEPAKRGKAAEASSLS
PKEKAKRQLFARMGVDPEHGWKAKYEILPGKEKVIEELRRLAKEADTIYLATDLDREGEA
IAWHLRESIGGDDERYKRVVFNEITKKAIQEAFAQPGELDINRVNAQQARRFLDRVVGYM
VSPLLWQKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLATAQQAKVRFEV
AREKGEAFKPLNEAQAKAAMEKLKSATYSVSKREDKPTSSKPSAPFITSTLQQAASNRLG
FGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALVMARGFIESEFGSQYLPEKPNFYSSK
EGAQEAHEAIRPSDVNLRPNQLSGMERDAERLYELIWRQFVACQMPPAQYLATSVTVTAG
DFELRAKGRILKFDGYTRVLPQQSKTGEDDVLPEMKQGEAMDLLALDPSQHFTKPPARYS
EASLVKEMEKRGIGRPSTYAAIISTIQDRGYVSLHNRRFYAEKMGEIVTERLSESFENLM
DYGFTAGMEEHLDDVAQGEREWKHVLDEFYGDFRRKLEIAESPDSGMRANQPTLTDIPCK
VCGRPMMIRTASTGVFLGCSGYSLPPKERCKSTINLIPGDEIAADDEGESESLVLLGKRR
CPICSNAMDAYLLDEKHKLHICGNNPDCAGYEVEEGQFRIKGYEGPSLECDKCGSEMQLK
TGRFGKFFGCTNAECKNTRKLLKNGEPAPPKMDAVKMPELKCEKVDDTYVLRDGASGLFL
AASQFPKNRETRAPLVSELIPHRDEIDPKYHFLLQAPQQDPEGRPAVIRFSRKTKEQYVQ
SEVNGKPTGWKAFYDGGKWKVEDKR
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatcaccggccaaggccaagaccatcaacaagtac
ctgggtaaccagtacgtggtgaagtcgagtatcggccatatccgcgaccttcctaccagc
ggctctgcgagcaaggagccggccaagcgcggcaaggctgccgaagcctcgtcgctgtcg
ccgaaggaaaaggccaagcgccagctgtttgcccgaatgggagtggaccctgagcacggc
tggaaagccaagtacgagatcctgccgggcaaggagaaggtgatcgaggaacttcgacgc
ctggccaaggaagccgacaccatctatctcgcaaccgacttggatagagagggagaggcc
atcgcctggcacctgcgcgaatccatcggcggcgacgacgagcgctacaagcgcgtggtg
ttcaacgagatcaccaaaaaggccattcaggaagccttcgcccagcccggcgagctggac
atcaaccgggtaaacgcccagcaagcgcggcgcttcctcgatcgggtggtgggctacatg
gtctcgccgctgctctggcagaaaatcgcgcgtgggctttccgccggtcgcgtacagtcg
gtggcggtcaagctggtggtcgagcgcgagcgcgagattcgcgctttcgtgcccgaagag
tactgggaagtgcacgccgatctggcgaccgcgcagcaggccaaggtgcgcttcgaagtc
gcccgcgagaagggtgaggcgttcaagccgctgaacgaggcgcaggccaaggccgcgatg
gaaaagctcaaaagcgcgacgtacagcgtcagcaagcgcgaggacaagccgacctcgagc
aagccgtcggcccccttcattacctcgacgctgcagcaggcggcgagcaatcgcctgggc
ttcggcgtaaagaagaccatgatgatggcccagcgcctgtacgaagctggctacatcacc
tacatgcgtaccgactcgaccaatctttcggccgatgcgctggtcatggcccgcgggttc
attgaaagcgagttcggcagccagtacctgccggagaagcccaacttctattccagcaag
gaaggcgcccaggaggcccacgaggcgattcgtccatcggacgtcaacctgcggcccaac
cagttgtcgggcatggagcgcgacgccgagcgcctctatgagctgatctggcgccagttc
gtcgcctgccagatgccgcctgcacagtacctggcgaccagcgtgaccgtgacggccggt
gatttcgaactgcgtgccaagggtcgcatcctcaagtttgacggctacacccgcgtgctg
ccgcagcagagcaagaccggcgaagatgacgtcttgccggaaatgaagcagggcgaggcg
atggatttgctcgcgctcgaccccagccagcacttcaccaagccgccggcgcgttattcc
gaggcgagcctggtcaaggaaatggaaaagcgcggcatcggccggccgtccacctacgcg
gcgatcatttcgaccattcaggatcgcggctatgtctcgctgcataaccgccgcttctac
gccgagaaaatgggcgagatcgttaccgagcgcctctccgagagcttcgagaacctgatg
gactacgggttcaccgccggcatggaagagcatctggacgatgtcgcgcagggcgagcgg
gagtggaagcacgtgcttgacgagttctacggtgacttccgccgcaagctcgagatcgca
gagtcgccggatagcggcatgcgtgccaaccagccgaccctgaccgatattccgtgcaag
gtctgcgggcggccaatgatgatccgcaccgcctcgaccggcgtgttcctcggttgctcc
ggctacagcctgccgccgaaggagcgctgcaaatcgactatcaatctgattccgggcgac
gaaatcgcagccgatgacgagggcgagtccgaatccctggtgctcttgggcaagcgccgc
tgccccatctgcagcaatgcgatggatgcctacctgctcgacgaaaagcacaagctgcat
atttgcggtaacaaccccgactgcgcgggctacgaagtggaggaggggcagttccgcatc
aagggctacgagggccctagtctggagtgcgacaaatgcggcagcgaaatgcagctcaag
accggccggttcggcaagttctttggctgcaccaatgcggaatgcaagaacacccgcaag
ctgctgaagaatggtgagccggcgccgccgaagatggatgcggtgaagatgccggaactc
aaatgcgaaaaggtcgacgatacctacgtgctgcgcgacggggcgtccgggctgttcctg
gccgccagccagttcccgaaaaaccgcgaaacgcgcgcgccgttggtcagcgagctgatc
ccgcacagggatgagatcgatcccaagtaccacttcctgctccaagcgccgcagcaggat
cccgaaggacgcccagcggtcattcgcttcagtcgcaagaccaaggagcagtacgtgcag
tccgaggtcaatggcaagcccaccggctggaaggcgttctacgacggcggtaagtggaag
gtggaagacaagcgctga
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