Stutzerimonas balearica: CL52_15605
Help
Entry
CL52_15605 CDS
T03573
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
pbm
Stutzerimonas balearica
Pathway
pbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CL52_15605 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_15605 (sbcB)
Enzymes [BR:
pbm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CL52_15605 (sbcB)
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CL52_15605 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CL52_15605 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CL52_15605 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJE16389
UniProt:
A0A8D3Y313
LinkDB
All DBs
Position
complement(3327977..3329407)
Genome browser
AA seq
476 aa
AA seq
DB search
MESSIFWYDYETTGISPRCDRPLQVAGIRTNEALEEIGEPLNLFCRPSDDILPHPAACLV
TGITPQVLEREGLCEAEFMHRLHQELAQPGTCGAGYNNLRFDDEMTRYSLYRNFFDPYAR
EWQGGNSRWDLIDLVRTAYALRPEGLQWPQDEGRVSLKLERLTAANGLEHLHAHDALSDV
RATIALARLIRDAQPRLYDYLFRLRRKHAVLDQIELFKPLVHVSGRFSAQRHFMAVVLPV
AWHPSNRNALIVCDLHADPSPLWDESGETLRRRLYTRREELAENELPTPLKLVHVNRCPV
LAPLSVLRDIDVQRLQLDLPLYQRRAQMLCERREQWQGKFAAIYAQEGYEPCEDPEQQLY
DGFLGERDRRLCEQVRLATAEECAGRQWMFDDIRLGELLFRYRARNFPQSLSEQERLHWH
DFCRHRLLQPEFGAPNTLAQFEQTLGQLLEQATPEQAVVLQCWREHAAQLQSRYGL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
ttggaatcgagcattttctggtacgactacgaaaccaccggcatatcgccccgttgcgac
cggccgttgcaggtggccggtatccgtacgaacgaggcgctcgaggaaatcggcgagcca
ctcaacctcttttgcaggccgtcggacgatatcctgccgcacccggcggcgtgcctggtc
accggcatcaccccgcaggtcctcgagcgcgagggactctgcgaggccgagttcatgcat
cgattgcatcaggagctggcgcagcccggtacctgcggcgccggctacaacaacctgcgc
ttcgatgacgagatgacgcgctacagcctgtatcgcaattttttcgatccctatgcgcgc
gagtggcagggcggcaacagccgttgggacctcatcgacctggtgcggaccgcttacgcg
ctgcgcccggaagggcttcagtggccgcaggatgaggggcgcgtctcgttgaagctcgaa
cggctcacggcggcgaacgggctcgagcacctgcatgcgcacgacgccctgtccgacgta
cgcgcgaccatcgctctggcgcgcttgattcgcgatgcacagccgcggctgtacgactac
ctgttccggctgcggcgcaagcatgcggtgctcgaccagatcgaactgttcaagccgctg
gtgcatgtgtccggccgtttctcggctcagcgacacttcatggccgtggtgctgcccgtg
gcgtggcatccatccaatcgcaacgccttgatcgtctgcgacctgcacgccgatccctcg
ccgttgtgggacgaatcaggcgagaccctgcgcaggcgtctttatacgcgccgcgaggag
cttgccgaaaacgagctgccgacgccgctcaagctggtgcatgtcaatcgttgcccggtg
ctggcgccattgagcgtattgcgggatatcgacgttcagcgcctgcagctggacctgccg
ctttatcagcgccgggcgcaaatgctctgtgaacgccgcgaacaatggcagggcaagttc
gctgcgatatatgcgcaggagggctatgaaccctgcgaagacccggagcagcagctctac
gatggttttctcggtgagcgcgaccgtcggttatgcgaacaggttcgcctagcaactgcc
gaggaatgcgcaggccgccaatggatgtttgatgacatacgccttggcgagcttttgttt
cggtatcgggcccgcaactttccgcaaagtctcagcgaacaggaacggctgcactggcac
gacttctgccgtcaccgcctgttgcaacccgaattcggagcgcccaatacgctggcccag
tttgagcagacgttgggtcagttgctggagcaggcgacaccggagcaggccgttgttttg
caatgctggcgcgagcatgcggcgcagttgcaaagccgctatggcctgtga
DBGET
integrated database retrieval system
