KEGG   Stutzerimonas balearica: CL52_16210
Entry
CL52_16210        CDS       T03573                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pbm  Stutzerimonas balearica
Pathway
pbm02020  Two-component system
pbm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pbm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CL52_16210
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CL52_16210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbm03021]
    CL52_16210
Transcription machinery [BR:pbm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CL52_16210
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID Acyl-CoA_dh_C HTH_IclR HTH_21
Other DBs
NCBI-ProteinID: AJE16506
UniProt: A0A8D3Y387
LinkDB
Position
3444370..3445875
AA seq 501 aa
MKPSLVLKMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPMLEREEDGDDYDGAD
PMAEASEAGSSTGDNDQPALDSRYEETSHSAESLDDNEWSERIPSELPVDTAWEDIYQTS
ASSLPASDDDEWDFTTRTPTGLSLQAHLLWQLNLTPMSDTDRLIATSIIDGINDQGYLEE
SLEDILASIDPELDVEMDEIEVVLHRVQQFEPAGIGARDLRECLLLQLRQLPSNTAWLAE
AQRLVSDYLDVLGNRDYSALMRRMKLKEDELRQVIELVQSLNPRPGSQIEASEPEYVVPD
VIVRKHNGRWLVELNQEAMPRLRVNPQYAGFVKRADTSADNTFMRNQLQEARWFIKSLLS
RNETLMKVATQIVEHQRGFLEHGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRG
IYELKYFFSSHVSTTEGGECSSTAIRAIIKKLVAAENPKKPLSDSKIAGLLEAQGIQVAR
RTVAKYRESLGIAPSSERKRL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgaaaccatcgctagtcctgaagatgggccagcagctgaccatgacgcctcagctgcaa
caagccattcgattgctccagctttcaacgctggatctgcaacaggaaatccaggaggcc
ctggattctaacccgatgctcgagcgcgaggaggacggcgacgactacgacggcgccgac
ccgatggccgaagccagcgaagcggggagcagcaccggagacaacgaccagcctgctctc
gacagccgctacgaagagaccagccactcggccgagagcctggacgataacgaatggagc
gagcgaattcccagcgagctgcctgtcgataccgcctgggaagatatctaccagaccagc
gccagcagcctgccggccagcgacgatgacgagtgggatttcaccacgcgcaccccgacg
ggcctcagccttcaggcccacctgctctggcagctcaatctcacgccgatgagcgatacc
gatcgcctgatcgccacctcgatcatcgacggcatcaacgaccagggttatctggaagag
agcctggaagacattctcgcgtcgatcgaccccgaactcgatgtggagatggacgagatc
gaggtcgttctgcaccgcgtacagcagttcgagcctgccggtatcggggcccgcgatctg
cgcgaatgcctgctgctgcagttgcgccagctgccgtcgaacaccgcctggcttgccgaa
gcgcaacgcctggtcagcgactacctcgacgtgctcggcaaccgcgactacagcgctcta
atgcgtcgcatgaagctcaaggaagacgagctgcgccaggtcatcgaactcgtgcaatct
ctcaaccccaggcccggctcgcagatcgaagccagcgaaccggagtatgtcgtcccggat
gtcatcgtgcgcaagcacaacggccgctggctggtcgagctcaatcaggaagccatgccg
cgcctgcgcgtcaatccgcagtacgccggcttcgtcaagcgagccgatacgagcgccgac
aacacgttcatgcgaaatcagctgcaggaggcgcgctggttcatcaagagcctgctgagc
cgcaacgagaccctgatgaaagtggcgacccagatcgtcgagcatcagcgcggttttctc
gagcacggcgaagaggcaatgaagcccctggtcctgcatgacatcgccgaagccgtcggc
atgcacgagtcgaccatttcgcgcgtcacgacacagaaatacatgcatacgccgcgcggc
atctacgagctcaagtactttttctccagccacgtaagcacaaccgaaggcggcgaatgc
tcgtcgacggcgatccgcgcgatcatcaagaaactggttgccgcggaaaacccgaaaaag
ccattgagcgacagcaagatcgctggtttactggaggcacaaggcattcaggtagcgcgt
cgtaccgtggcgaaatatcgcgaatcactgggcatcgcgccgtcaagtgagcgaaagcga
ctgtag

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