Stutzerimonas balearica: CL52_17225
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Entry
CL52_17225 CDS
T03573
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pbm
Stutzerimonas balearica
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_17225
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CL52_17225
Archaeal homologous recombinant proteins
CL52_17225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
AJE16693
UniProt:
A0A8D3Y3R3
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Position
3653557..3654792
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AA seq
411 aa
AA seq
DB search
MRLIHTSDWHLGQTLHGQDRDHEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQ
ERLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVAEGQLDH
QRLLVPLHDVNGNTAAWCLTLPFLRPAEVTGLELGDDYMAGIRQVHERLIAAAEAVRQPG
QALVAMSHAHMAGGAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKPQQVAGQVR
VRYSGSPLPLSFAEVNYPHQVLLVELDGEALKQVDSLAVPRAVEMIRIGRAPLAEVIAAL
EALPPTGLFDEHLPWLEVRVLLDEPLPDLRQRIETAITGKACRLVRIASEYAGKRGETES
DVLLGLDQITPQELFARAWEEQYGNPADEQALDDFATLLQRVEFAHAEDDR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctccgactggcacctcggccagaccctccacggccaggaccgc
gaccacgagcatgcgcagttcctcgcctggctgctcgaccagctggtcgcccaccgcgcc
gacgccctgctgatcgccggcgacgtgttcgacacggtcaacccgccactcaaggcccag
gagcgcctctacgacttcatcgtccgcgcccacgaaaaactcccgcagctggacatcgtg
atgatcgccggcaaccacgactcgggcgggcgcatcgagctgccggcgccgctgatgaag
cgcctcaatgcccatgccgtcggccgcatcagctgggtcgccgagggccagctcgaccat
cagcggctgctggtgccgctgcacgacgtcaatggcaatactgccgcctggtgcctcacc
ctacccttcctgcgcccggccgaggtcactggcttggaactgggcgacgactacatggcc
ggcattcgtcaggtgcatgaacgcctcatcgccgccgccgaggccgtgcgccagcccggc
caggcgctggttgccatgagccatgcgcacatggccggcggcgcggtgtcggaggagtcc
gagcgcaatatcgtcatcggcaatgccgaggccctgccggccagcctgtttcccgaatcg
gtcgcctacgtcgccctcggccatctgcacaaaccgcagcaggtcgccgggcaggtgcgc
gtccgctacagcggctcgccactgccgctgtccttcgccgaggtcaattacccgcatcag
gtgctgctcgtcgagctcgatggcgaggccctgaaacaggtcgacagcctggcggtgccg
cgtgcggtggagatgatccgcatcggccgcgccccgctggccgaggtgatcgccgcgctg
gaggcgctgccgcccaccggcctgttcgacgaacacctgccctggctcgaggtacgcgta
ctgctcgacgaaccgctgccggacctgcgccagcgcatcgaaaccgcgataaccggcaag
gcctgccggctggtgcgcatcgccagcgaatacgccggcaagcgtggcgagacggaatcg
gacgtgctgctcggcctcgaccagatcaccccgcaggagctgttcgcccgcgcctgggaa
gaacagtacggcaacccggcggacgaacaggcgctggacgatttcgccaccttgctgcaa
cgcgtcgagttcgcccatgcggaggatgaccgatga
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