Stutzerimonas balearica: CL52_17720
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Entry
CL52_17720 CDS
T03573
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pbm
Stutzerimonas balearica
Pathway
pbm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CL52_17720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbm03021
]
CL52_17720
03400 DNA repair and recombination proteins [BR:
pbm03400
]
CL52_17720
Enzymes [BR:
pbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CL52_17720
Transcription machinery [BR:
pbm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CL52_17720
DNA repair and recombination proteins [BR:
pbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CL52_17720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
ApbA_C
DUF3150
PPDFL
Motif
Other DBs
NCBI-ProteinID:
AJE16790
UniProt:
A0A8D4C4S4
LinkDB
All DBs
Position
complement(3736045..3740244)
Genome browser
AA seq
1399 aa
AA seq
DB search
MKDLLNLLKNQGQIEEFDAIKIALASPEMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVALAKVRRERMAHIELASPVAHIWFLKSL
PSRIGLLLDMTLRDIERVLYFESYVVIDPGMTTLEKGQLLNDEQYFEALEEFGDDFDARM
GAEAVRELLGQIDLEHEINRLREEIPQTNSETKIKKLSKRLKLMEAFHGSGNLPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT
LRLHQCGLPKKMALELFKPFIFGKLEAKGMATTIKAAKKMVERELPEVWDVLAEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNVLSPANGEPIIVPSQDVVLGLYYMTREAVNAKGEGRVFADLQEVDRVFRAG
EASLHARVKVRINETINERDGSVTRNTRIVDTTVGRALLFQIVPAGMPFDVVNQPMKKKA
ISKLINQAYRTVGLKDTVIFADQLMYTGFAYSTLSGVSIGVNDFVIPDEKARIIDAATEE
VKEIESQYASGLVTQGEKYNKVIDLWSKANDEVSKAMMANLSKEKVVDREGKEVEQDSFN
SMYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEHDCGTEQGLHMTPHIEGGDVVEPLGERVL
GRVIARDVLKPGTEEVLVPAGTLIDEQWVDFIELNSIDEVVVRSPISCETRYGICSKCYG
RDLARGHLVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRTSAVDNVLVKNGGVIRL
HNLKYVERADGALIAVSRSGELAVADDFGRERERYKLPYGAVISVKEGDKVEAGAVVAKW
DPHTHPIVTEMKGRVTFVGMEENITIKRQTDELTGLTNIEVMDPKDRPAAGKDIRPAVKL
VDASGKDLLLPGTDVPAQYFLPANALVGVADGAEVGVGDVIARIPQETSKTRDITGGLPR
VADLFEARRPKEPSILAEISGTISFGKETKGKRRLVITPTDGSDPYEELIPKWRHLNVFE
GEQVNKGEVISDGPSNPHDILRLLGVSALARYIVNEIQDVYRLQGVKINDKHIETILRQM
LRKVEITESGDSSFIKGDQMELTQVLEENERLSEEDKFVAKYVRVLLGITKASLSTESFI
SAASFQETTRVLTEAAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHSERKRKRDADKPVR
VSADEVEAALTEALNSSGS
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacttgcttaatctgttgaaaaaccagggtcaaatcgaagagttcgatgccatc
aagattgccctggcttcgcctgagatgatccgttcgtggtcgttcggtgaggtgaagaag
cccgagaccatcaactaccgtacgttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcggcccggtcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgtgagaagtgcggcgtcgaagtcgcgctggccaaggtgcgccgcgag
cgcatggctcacatcgaactggcttcgccggttgctcacatctggttcctgaagtcgctg
ccgtcccgtatcggtctgctgctggacatgaccctgcgcgacatcgagcgtgtgctctat
ttcgagagctacgtggtcatcgatccgggcatgaccacgctggaaaaaggtcagctgctc
aacgatgagcagtacttcgaagcgctggaagagttcggcgacgatttcgatgcccgcatg
ggtgccgaggccgtgcgtgagctgctgggccagatcgatctggagcacgagatcaaccgt
ctgcgggaagagattccgcagaccaactcggaaaccaagatcaagaagctgtccaagcgg
ctgaagctgatggaggccttccacggctcgggcaacctgcccgagtggatggtgctgacc
gtcctgcctgtgctgccgccggacctgcgtccgctggttccgctcgatggcggccgcttc
gcgacctcggatctcaacgatctgtatcgccgggtgatcaaccggaacaaccgtctgaag
cgtctgctcgatctggccgcgccggacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaagcggtcgacgcgctgctggacaacggtcgccgtggccgtgccatcaccggctcgaac
aagcgcccgctcaagtcgctggccgacatgatcaagggcaagcaaggtcgtttccgccag
aacctgctgggtaagcgcgtcgactattctggccgttcggttatcaccgtaggcccgacc
ctgcgcctgcaccagtgcggtctgccgaagaaaatggcactcgagctgttcaagccgttc
attttcggcaagctcgaagccaaaggcatggctaccacgatcaaggccgccaagaagatg
gtcgagcgtgagctgcccgaggtctgggacgtgctcgccgaggtcatccgcgaacatccg
gtcctgctcaaccgcgcgccgaccctgcaccgactgggcattcaggcgttcgaaccggtg
ctgatcgagggtaaggcaatccagctgcatccactggtatgtgccgcgtacaacgctgac
ttcgacggcgaccagatggccgtgcacgtcccgctgaccctcgaggctcagctggaggcg
cgtgccctgatgatgtcgacgaacaacgtgctgtcgccggccaacggcgagccgatcatc
gtgccgtcgcaggacgtggttctcggtctgtattacatgacccgagaggccgtcaacgcc
aagggtgaaggccgtgtcttcgccgatctgcaggaagtcgaccgcgtgttccgtgcgggc
gaggcgtcgttgcatgcgcgtgtgaaagtgcgcatcaacgagaccatcaacgagcgtgat
ggcagcgtcacgcgcaatacccgcatcgtcgacaccacggttggccgcgcgctgctgttc
cagatcgttccggctggcatgccgttcgatgtggtcaaccagccgatgaagaaaaaggct
atttccaagctgatcaaccaggcctaccgtaccgtgggcctgaaagacacggtgatcttc
gccgaccagctgatgtacaccggtttcgcctactcgaccctgtccggcgtctccatcggc
gtcaatgacttcgtcatccctgatgagaaggcgcgcatcatcgatgcggcgaccgaagaa
gtgaaggagatcgaaagccagtacgcctccggtctggttacccagggcgagaagtacaac
aaggtgatcgacctctggtcgaaagcgaacgacgaagtctccaaggcgatgatggccaac
ctttcgaaagagaaggtcgtcgatcgcgaaggcaaggaagtggagcaggactcgttcaac
tccatgtacatgatggccgactccggtgcgcggggttccgcagcgcagattcgccagctg
gccggtatgcgcggcctgatggccaagccggacggctcgatcatcgagaccccgatcacc
gcgaacttccgtgagggtctgaacgtactccagtacttcatttcgacccacggtgcacgt
aagggtctggccgacaccgcgctgaagactgccaactccggttatctgacccgccgtctg
gtcgacgtcgctcaggacctggtcgtaaccgagcatgactgtggcaccgagcagggcctg
cacatgactccgcacatcgagggtggcgacgtcgtcgagccgctgggtgagcgggtgctg
ggccgggtcatcgcgcgcgatgtgctcaagccgggcaccgaagaagtgctggttccggcc
ggtaccctgatcgacgagcaatgggtcgacttcatcgagctgaacagcatcgacgaagtg
gtcgtgcgttcgccgatcagctgcgaaacccgctatggcatctgctcgaagtgctacggc
cgcgacctggcccgtggccatctggtcaatatcggcgaagcggtcggtgtcatcgcggct
cagtcgatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggtggtgcg
gcgagccggacctcggctgtcgataacgtactggtgaagaatggcggtgtgatccgcctg
cacaacctcaagtacgtcgagcgtgccgacggcgcgctgattgcagtgtcgcgttccggt
gagctggcggttgccgacgacttcggtcgagagcgcgagcgctacaagctgccgtacggt
gccgttatttcggtcaaggaaggtgacaaggtcgaggcgggggctgtcgtggccaagtgg
gacccgcacacccacccgatcgtcaccgagatgaaggggcgcgtgaccttcgtcggtatg
gaagagaacatcaccatcaagcgtcagaccgacgagctgacgggtctgaccaacatcgag
gtgatggatccgaaggaccgtccggctgccggcaaggatattcgtccggccgtgaagctg
gtcgatgccagtggcaaggacctgctgctgccgggcaccgacgttccggctcagtacttc
ctgcccgccaatgcgctggtcggtgtggccgatggtgccgaggtgggcgtgggcgacgtc
atcgcacgtatcccgcaggaaacctccaagacccgcgacatcaccggtggtctgcctcgc
gtagccgacctgttcgaggcgcgccgtccgaaggagccttcgattctggccgagatcagc
ggcacgatttcgttcggcaaggaaaccaagggcaagcgtcgtctggtcatcacgccgacc
gatggtagcgatccgtacgaagagctgattccgaagtggcgtcacctcaacgtcttcgaa
ggcgagcaggtgaacaagggcgaagtgatttccgacggcccgagcaacccgcacgacatc
ctgcgactgctgggcgtcagtgcactggcgcgctacatcgtcaacgagatccaggacgtt
taccgcctgcagggcgtaaagatcaacgacaagcacatcgagaccatcctgcggcagatg
ctgcgcaaggtcgagatcaccgagtcgggcgattccagcttcatcaagggtgatcagatg
gagctgactcaggtgctggaagagaacgagcgcttgagtgaagaggacaagttcgtcgcc
aagtatgtgcgcgtcctgctgggtatcaccaaggcatcgctgtcgaccgagtcgttcatc
tccgcagcgtccttccaggagaccactcgcgtactcaccgaggcggcagtgactggcaag
cgcgactatctgcgtggtctgaaggaaaacgtggtcgtcggtcgtctgatcccggcgggt
accggtctggcctatcacagcgagcgcaagcgcaagcgtgatgccgacaagccggtacgg
gtgagtgctgatgaagtggaagcagcgctgaccgaagcgctgaactccagcggtagctga
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integrated database retrieval system
