Stutzerimonas balearica: CL52_18735
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Entry
CL52_18735 CDS
T03573
Name
(GenBank) RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pbm
Stutzerimonas balearica
Brite
KEGG Orthology (KO) [BR:
pbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbm03009
]
CL52_18735
Enzymes [BR:
pbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CL52_18735
Ribosome biogenesis [BR:
pbm03009
]
Prokaryotic type
rRNA helicases
CL52_18735
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
SBP_bac_3
CMS1
Motif
Other DBs
NCBI-ProteinID:
AJE16976
UniProt:
A0A8D3Y498
LinkDB
All DBs
Position
3967036..3968415
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AA seq
459 aa
AA seq
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MSSSSFSSLPLRAATQANLDALGYRQMTPIQAQSLPPMLQGKDVIAQAKTGSGKTAAFGI
ALLEPLNPRYFGCQALVLCPTRELADQVAKELRRLARAAGNIKILTLCGGVPIGPQIGSL
EHGAHVIVGTPGRVQEHLRKATLRLDGLNTLVLDEADRMLDMGFHDAIAEIVAQTPERRQ
TLLFSATYPEDVEQLAARFLREPLRVEVQALHDDSQIEQRFYEIAPEQRMEAVMRLLECF
RPQSCVAFCFTRQQCQELVDYLEARGIYAQPLHGDMEQRERDQVLAMFANRSLSVLVATD
VAARGLDIDALDLVINVELARDPEVHVHRIGRTGRAGRKGMAASLVAPAEAHRAQAIEHL
QQAPLVWHPLSSLKPRSEEPLRPPMSTLCIAAGRKEKLRPGDVLGALTGDAGIAGDKVGK
IAVFDYQTFVAIERSAADKALRRLSEGRIKGRSLKVRIL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagttcttccttctccagcctgccgctgcgcgccgccacccaggccaacctcgac
gccctcggctatcgccagatgacgccgatccaggcccaaagcctgccgccgatgctccag
ggcaaggatgtgatcgcccaggccaagaccggcagcggcaagacggcggcctttggcatc
gccctgctcgagcccctgaacccgcgctacttcggctgccaggcgctggtgctgtgcccg
acgcgcgaactcgccgaccaggtcgccaaggagctgcgccgactggcgcgcgctgcgggc
aacatcaagatcctgaccctctgcggcggggtgccgatcggcccgcagatcggttcgctc
gagcacggcgcccatgtcatcgtcggtacgcccggtcgcgtccaggaacatctgcgcaag
gccacgctgcggctcgacgggctcaatacgctggtcctcgacgaggccgaccgcatgctc
gacatgggctttcacgacgccatcgccgagatcgtcgcgcagactcccgagcgccggcaa
acgctgctgttctccgccacctaccccgaagacgtcgaacagctggccgcgcgttttctg
cgcgagcccctgcgcgtggaggtgcaggcgctgcacgacgacagccagatcgagcagcgt
ttctacgagatcgcgccggagcagcgcatggaggcggtcatgcgcctgctcgagtgcttc
cgcccgcagagttgcgtggccttctgcttcacccgccagcaatgccaggagctggtcgac
tacctcgaggcacgtggcatctacgcgcaaccgctgcatggcgacatggagcaacgcgag
cgtgaccaggtgctggcgatgttcgccaaccgcagcctctcggttctggtggcgaccgat
gtcgccgcccgcggcctggacatcgacgccctggacctggtcatcaacgtcgaactggcg
cgcgacccggaagtacatgtgcatcgaatcggccgcaccgggcgtgcgggccgcaagggt
atggcggcaagcctggtggcgccggccgaagcgcaccgtgcgcaagccattgagcacctg
caacaggcaccgctggtctggcacccgctgtccagcctgaagccgcgtagcgaggaaccg
ttgcgcccgccgatgagcaccttgtgcatcgcggccgggcgcaaggaaaagctgcgcccg
ggcgatgtgctcggcgccctcactggcgatgcgggcattgccggcgacaaggtcggcaag
atcgccgtgttcgactaccagacctttgtcgccatcgagcgcagcgcggccgacaaggcg
ctgcgccggttgagcgaaggccgcatcaagggccgctcgctgaaggtgcgcatcctctag
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