Paracoccidioides brasiliensis: PADG_00568 Help Entry PADG_00568        CDS       T03549                                  Name (RefSeq) CCR4-NOT core subunit CDC39   KO K12604   CCR4-NOT transcription complex subunit 1 Organism pbn  Paracoccidioides brasiliensis Pathway pbn03018   RNA degradation Brite KEGG Orthology (KO) [BR:pbn00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PADG_00568  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pbn03019]     PADG_00568 Messenger RNA biogenesis [BR:pbn03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      PADG_00568   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      PADG_00568 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT ARM_Cnot1 NOT1_connector Motif Other DBs NCBI-GeneID:  22580391 NCBI-ProteinID:  XP_010756403 UniProt:  C1G128 LinkDB All DBs Position Unknown AA seq 2347 aa AA seqDB search MSFPSSAQSLIASGTDKPSASRTARSQPSAWGPSASQSNVRRGPAPLCTNLSNSNISGSP PQRPLQSQSPAPSASVTSPLTSTFSAILSSSTRLSNTRRNPSPAPTPVSFSSLQQSGGQQ QQQSGQTISSPKTRSLTPSSTSHLATSTASSGGSGGGGGGGGGGGGVGGAGISRSAAFSP LLTGTTINSPTGFPSDKSGSAATSGINTGQSSLSKISVAQVFLLLDSINEKEGKEKWETK AAQIHKLVDSNGMEVFAKYFRRLLSGNAPQIFPGINKVVENAGNYPLLVQEVHKVSQDLE QAGKIAETIDASDGDIFRDFDLSTFLDHFKLDPIAKVSLTLAFKNVSKADLRTKADAILT NSTPQFLHSLSAISESNKDFSTSFISLTLERFILYPPRNFDDDIKQKLVYACRTRYQSTD MDVPPEIESVLQMFGLSDPQLSLVRQILIRGPKSMNSQDSIVETINSIGPSGWSEEQIAS AFLYIIISPSWRQFSPELLLTTVQNHQRAEPFNWSAFMQAFDRGGLVIDPNQFVRLFNAL VAVSNDNPAVDVQRLWSGEWENRDTQLSFLSAALSANIDVSRIPNFHPTFPPNIFSDASE TVRQQAEQAQHSLLRSRDTVKAIFDLVLKTPGTWSLPDSQRFVKTVLQHDLPIFLCSAFA IPQPWTTVQINFVMRSFSIFVAKRQDGYQFALHGVWKLNREWVVEQLFHGFTQDPSCTER IYEHAVEHGWLDYILEFTNGLAMDLASLAHRKDDYDLEQWVKRAAQKAPIDMGSLLSKFL KIKADDELRVQRKEQPAPQMVSLSVKTVYALLQILEDYIVDHETLTPIQRICLQTYPRLI NYGEGFDDIIEANGNHGNAIPEEIDKQMQELFGKMYHEELSLREILELMRRYKTSRDPAE QDLFTCMVHGLVDEYNCYHTYPLEALTKTAVMFGGIINFKLISGIPLKVGLGMILDAVRE HEPHQPMYKFGVEAIEQLINRLPEWAGFCNLLLQIPSLQGTTIYRKAEEVLRDQGHHPVN EDGGAELNGLPDGLAMTNGNIDDLLATDTTQRKFSSLHVDPPLRPEIYRDPDEEVHDKIL FILNNVSEQNINVKLKDLKDVLQEEHYQWFASYLVEERAKLQPNFQQLYLDLLELISDKT LWMEVLRETYVSAIRLLNADSTLNSATERTHLKNLGGWLGSLTIAKDKPIKHRNIYFKEL LIEAFDSQRLMVVIPFTCKVLVQAMKSTIFKPPNPWLMDILALLMEIYHFAELKMILKFE IEVLCGDLQLDYKAIEPSTCIRERPAQLEDGISSANIPEGLEAFEDMSLSNMNRVIRNER ISSTSIISSLPNLDQILVFPPSASTMADPGVLRQIVHSAVERAIAEIITPVVERSITIAS ISTAQLILKDFAMEPDEEKVRQAAGTMVRALAGSLALVTCKEPLKMSMTNYIRMIQQEFS DQPMPEGLILMCVNDNLDAACGIVEKAAEEKSLPEIEKVIESQLEARRRHRATRPNEPFI DPSISRWGFFIPEPFRQVPGGLNKEQLAIYENFARQSRGAGHSHIQNASTDSGKQIPDVL QEPFPAIPNLSTPAEQPAVPHHVAQTQQESSLQQPAIAAAQGQMNGFLDNANPREKVEAL VSQLQLSARNASEERLKDLGRDNAILQDYNQVFRTILTAPNGEDLARLVALKICTTLYSR TESRLEIELLVHILAKICELSSLVARYTWAVLADVDDEHMFNVPVTVALIDAGLLDLQRV DMILAKLIQEKNVPALEVLSNLIDQVLLNDEPSALRSDFSGSLDAMNKWVVENPDLSVAK DIIRKLRESGIPETANALLTDQARSKRDQMEYIFSEWIGVYKFACSNDRTYSTFLKDIHQ RQVMNNQEDSALFFRLSIDISVAMFEHECQNPNGNVDEAFLYIDALAKLVILLVKFQGES TGAVKASKPVYLNSILSLLVLVLNHHQVMRGDSFNQRVFFRLFSSILCEYSMCGLEKADQ HKEMMSVFADKFLSMQPKHAPGFVYAWLALISHRVFVSGMLNLPDQSGWESYSEIMQVLL PYIGDQLKPANVSFVAKDLYKGVLRIFLLLHHDFPEFVAENHYQFCNVIPSHCAQLRNLV LSAYPSTFQKLPDPFRDGLKIERIDEIRKAPKVAGDVVASIRRANLTDVVDNAFRSTVTD SAVQQICDAVSNPPVNKTGYFYTPINVDVTLLNALVMYIGQNAVTSSQKGSASAMFSNCP HTTLLEKLSRAFQPEARYYFFSAIANQLRYPNSHTHYFSFVILHLFGSEQPDQDSDIREQ IIRALLERLVVHRPHPWGLIITVQELLQNGNYAFFRLPFIQSTPEISNLFNVLLQHIQHQ SPRAALT NT seq 7044 nt NT seq  +upstreamnt  +downstreamnt atgagtttcccttcttccgctcaatctttgattgcttctggcaccgacaagccatcagct tccaggacggcgagatcccagccgtctgcctggggtcccagtgcgtcccaatccaacgtc cgccgtggtcccgctcccctttgcaccaacctctccaactcaaacattagtggatcacct cctcagaggcctcttcaatctcagagtccagctcccagtgcatctgtaacatctcccctg acgtccacattttccgccatcctgtcatcctctacccgcctgtccaatactcgaaggaat ccttcccctgcacccacgcctgtatctttctcctcgcttcaacaaagtggcggacaacag caacaacagtcaggccaaacaatctcttctccaaaaactagatccctcacaccttcctca acctcgcatctggctacctcgacggcttcaagcggaggcagtgggggtggtggtggtggt ggaggtggaggtggtggagttggtggcgcgggtatatccaggagtgctgcgttctctcca ctgttgacggggacaacaatcaactcaccgacaggattcccatctgacaagtccggatct gctgcgacatcagggattaacactggccagtcgtcactgtcaaaaatttccgttgctcag gtgttcctcctattggattccatcaacgagaaggaaggtaaggaaaagtgggaaacaaaa gctgctcaaattcacaagctggttgattcaaacggcatggaagtttttgcgaaatatttt cgtcgcctactttctggcaacgccccccagatcttcccagggatcaataaggtggtggaa aatgcaggaaactatcctttgctagtacaggaggttcacaaagtgtcacaggacctggaa caagctggaaagattgctgagactattgatgcatctgatggtgatatatttcgtgatttt gacctctcaactttccttgaccacttcaaattagatcccatagccaaagtctcattgaca cttgcttttaaaaatgtcagcaaggcagatttgcgcacaaaagctgatgccatccttaca aactcaacccctcaatttctgcatagtctctcagcaatctctgaatcaaacaaagatttc agcacgtcttttatcagtctcaccctagaacgctttatcctatacccgcctcgtaatttc gacgacgatattaaacaaaagcttgtatacgcgtgccggacgcgataccaatccacagac atggacgtgcctccagaaattgaatccgtcttgcagatgttcggattatctgatccccag ctgtctctagttcgtcaaatactgattcgaggacccaaatcgatgaacagtcaagacagt atcgtggagactataaattcaattggccccagtggctggagcgaagagcagatcgcctcc gcttttttatacataataatttcccctagctggcgccaattctcccccgaattacttctc accactgtccaaaaccaccaacgagccgaaccttttaattggtcagcttttatgcaggcc tttgaccggggtggcctggtcatcgatccgaatcaatttgttcgactatttaatgcgctt gtagctgtttccaacgacaatccagctgttgatgttcagcggctttggagtggagaatgg gaaaaccgagatacccagctgtcctttttatcagcagccctctccgccaacatcgacgtt tcacgcattcctaactttcatccaactttccctcccaacatttttagtgatgcttctgag actgttcgtcagcaagctgaacaggcccaacatagcttgcttcgctcgcgtgacacagtg aaagccatctttgatctcgtccttaaaacccccggaacatggagccttccggacagccaa agatttgtcaaaacagttcttcaacacgatctccctatattcctgtgctctgcgtttgct atccctcaaccatggaccaccgttcaaatcaacttcgtcatgcgatctttctctattttc gtcgccaagcgccaagatggttaccaatttgcgctacatggtgtttggaagctcaatcga gagtgggtggtagaacaactctttcatggatttactcaggacccttcgtgtactgaacgt atctacgagcatgctgtggaacatggctggctagactacattttggaattcaccaacggt ctagctatggacctagcatcattagcacaccgaaaggatgactatgatctcgaacagtgg gtcaagagagctgctcaaaaagcccctatcgatatggggagcctgttgtcgaaattcttg aaaatcaaggccgatgatgaactacgtgtccaaaggaaagaacagccagcaccccaaatg gttagcctgtcggttaaaacagtctatgcgcttctgcagattcttgaggactacatcgtg gatcatgaaaccttgacgccaatccaacgcatctgtcttcaaacttacccacggttgata aattatggagaaggattcgatgatattatcgaggctaatggaaaccatggcaatgcaatt ccagaagaaatcgataagcagatgcaagaattatttggcaagatgtatcacgaagaactt tctctgcgcgagatcctcgaattgatgcgacggtacaaaacgtcgcgcgacccagcagag caggatttatttacttgcatggttcatggccttgtggatgaatataactgttaccacaca tatccactggaggcattaaccaaaacagctgtcatgttcggtggaattattaatttcaag ctaatttccggtatcccactcaaagttggccttggaatgatactcgatgcggtgcgggaa cacgaacctcatcaaccgatgtacaagtttggcgttgaagctatcgaacaattgataaac cgccttccagagtgggctggattttgcaaccttcttttgcaaattccctctctccaggga actacaatctaccgtaaagccgaagaagtactccgagatcagggccaccatccagtaaat gaagacggcggagctgagttgaatggattacccgatggcttggctatgactaatggcaat attgatgacctcctagccactgataccactcaacgcaaattttcttcactacacgtcgac cctccacttcgcccggagatttatcgtgacccagatgaagaagttcacgacaaaatactc ttcattttaaataatgtttccgaacaaaatattaatgtgaagctaaaagatttaaaagat gttttacaggaagaacattaccagtggttcgcctcatatcttgtggaagaacgagcaaaa ttgcaaccgaattttcagcagctttatctcgaccttttagaacttatcagcgacaagaca ctttggatggaagttctcagagaaacttatgttagcgccatacgtttactgaatgcagac tctaccctgaactcagcgactgagcgcacgcatttgaaaaatttgggtggatggcttggt tctctaaccatagccaaagataaaccgataaaacataggaacatctacttcaaggaactt cttatcgaagcattcgatagccaacgcctcatggttgtcatacctttcacatgcaaagta ctagtgcaagccatgaaatccacgattttcaaaccccccaatccttggctaatggatatc cttgctcttttgatggagatataccatttcgcggaactgaaaatgattctcaaattcgaa atcgaggttctttgtggagatctgcaacttgattataaggctatagagccctcgacttgt atcagggagcggccagcacagctggaagatggtatctcgtcagcaaatattcctgaaggt ctggaggcgtttgaggatatgtcactcagcaacatgaaccgcgttattcggaatgagaga atatcctcgacctcgatcatttccagtctccctaatttagatcaaatcttggtgtttccc ccatccgctagtaccatggctgatcccggcgtcctgaggcaaatcgttcatagtgcagta gagcgagctattgccgaaatcatcactcccgttgtcgaacgttctattacaattgcatcg atctcaacggcccagctgattctgaaagacttcgcgatggaacctgatgaggaaaaggtt cgccaagcggccgggactatggttcgtgcgctggcaggtagtttggcgcttgttacgtgc aaggaacccctaaagatgagcatgacaaactatattcgaatgattcagcaagaattctcc gatcagcctatgcctgaaggcctcatcctcatgtgcgtcaatgataacttggatgcggct tgcggtatcgttgaaaaagcagcagaagagaaatctctccctgagatagaaaaagtcatt gagtcacaacttgaagcccgtcgtcgccaccgtgcaacgcgtcctaacgaaccgtttatc gatccttctattagtcgatggggatttttcatcccagaaccgtttaggcaggttcctggc ggcctaaacaaagaacagctggccatatatgagaattttgcgcgccaatcccggggagcc ggtcatagccacattcaaaatgcatcgactgactccgggaaacaaattcctgacgttctc caagagcctttcccggctattcctaatctatccactccggctgaacagccagctgttcca caccacgtggcacaaacgcagcaggaatccagcctgcaacaacccgccatcgctgctgct caaggccagatgaacggtttccttgacaatgctaaccctcgcgagaaagtagaagctctt gtttctcagctgcagctctcggctcgaaatgcttcagaagagcgtttaaaggaccttgga cgggataacgccatccttcaggactataatcaggttttccgcacgatcctgaccgcaccg aacggcgaagatttggcgcgattggtggctctcaagatatgcactacgttgtattctcgc actgagagccgtttggaaatcgaacttcttgtacacatactggctaagatctgtgaacta tcttcccttgttgctaggtatacctgggctgtacttgccgatgtggatgatgaacacatg ttcaatgtgccagtcactgtcgcccttattgatgcagggcttttggatcttcaacgtgtt gatatgatcctcgcaaaactcatccaggagaagaatgttcctgccctggaagtgctctcc aaccttatcgaccaagtccttctgaacgatgaaccttccgctctgcgatcggacttttca ggcagtctagatgcgatgaataaatgggttgtcgagaacccagatctcagtgttgctaag gatattatccggaagcttcgtgaatcgggcataccagaaactgccaacgcacttcttacg gaccaggcccgttcaaagcgtgaccagatggaatacattttcagtgaatggattggcgtg tataaatttgcctgttctaacgacaggacttacagcacattcctgaaagatatacaccaa agacaggtcatgaacaatcaggaggattcggctctattctttaggctcagcatcgatatc tctgtagccatgttcgaacatgagtgtcagaatccaaatgggaatgttgatgaagcgttc ttatatattgatgcgctcgcgaaattggtgatcttgctggttaagtttcagggcgagagc actggagccgtcaaggcaagcaagccagtctacttaaactccatcctttcgcttctagtt cttgtcttgaaccaccatcaagtgatgaggggcgacagtttcaaccaacgggtatttttt agacttttctcaagcatcctttgtgaatattccatgtgtggcttggagaaggcggaccag cataaagaaatgatgtccgtttttgccgacaaattcctgtccatgcaacccaaacacgcg cccgggtttgtctatgcatggctggcattgatatcccatcgtgtcttcgtatctggaatg cttaacctgccagatcaatcggggtgggaatcgtatagtgaaattatgcaagttttgctt ccatacatcggcgaccagctaaagccagccaatgtttcatttgttgcaaaggatctatac aaaggcgttcttcgcattttccttctgctccaccatgattttcccgagttcgtagcggag aaccactaccagttttgcaatgtcatcccgtcgcactgcgcacaattacgaaatcttgtc ttgagtgcatacccatcgacgttccagaaactacccgatccattcagagatggtttaaaa attgaacggatagatgaaatccgcaaggctcccaaagttgctggtgatgttgttgcttct attcgacgtgcgaatttgaccgatgtagttgataacgcattccgatcgactgtaactgac agcgcggttcagcaaatttgcgatgctgtatcaaacccccctgtcaataagaccgggtat ttttacactccgataaacgtggatgttaccctattgaatgcgctcgtcatgtatattggg caaaacgcagttacatctagtcaaaagggtagtgcatccgcaatgttcagcaactgccca catactactcttctcgagaagctttccagggcctttcaacccgaagctcgatactacttt tttagtgctattgccaatcagctgcggtatcccaacagccatacgcattacttcagcttt gtcatcctccatcttttcgggtctgagcagcccgatcaagactcggatattcgcgagcag atcattcgggctctccttgagcggctggtcgttcatcgaccccatccctggggcttgata atcacggtgcaggagttacttcagaatggcaattatgctttcttccgcttgccatttatt caatcgacgcctgagattagcaatcttttcaacgtgctgcttcagcacatccaacatcaa agcccgagggcggcgctgacttaa

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