Paracoccidioides brasiliensis: PADG_00788
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Entry
PADG_00788 CDS
T03549
Name
(RefSeq) ATP-dependent rRNA helicase SPB4
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pbn
Paracoccidioides brasiliensis
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbn03009
]
PADG_00788
Enzymes [BR:
pbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PADG_00788
Ribosome biogenesis [BR:
pbn03009
]
Eukaryotic type
Pre-60S particles
Helicases
PADG_00788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
22580569
NCBI-ProteinID:
XP_010756493
UniProt:
C1G1P8
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MAPAISQNSKLRAWDALTPPLSGWILDAISSMGFSRMTPVQASTIPLFIAHKDVVVEAVT
GSGKTLAFLIPMVERLLRLDSPIKKHHIGAIIISPTRELATQIYNVLQSLLAFHGPSATC
LQSAENGIGEQNESNPPPPYPSSVLKIVPQLLLGGTTTPAQDLSTFLKQSPNVLISTPGR
LLELLASPHVHCPQSSFEVLVLDEADRLLDLGFQEDLQKILQRLPKQRRTGLFSASVSEA
VDQIVRVGLRNPVKISVKVKGAGSEDKRTPASLQMTYLLTPPPHKLPAVKKILSSLHPSP
QKSIIYFSTCAAVDYFQDILSSILPEQFETIPLHGKHPSQVRQKNFARFVHSIASSILLT
TDVAARGLDIPSVDLVIQIDPPTDPKAFLHRCGRAGRAGRRGLSIILLHPGREEDYISFL
NVRKTPVTAYQCQSSPICISDEDATNATETIRKLVRRDRAIHDKAQKAFVSWVRSYSKHQ
ASSIFRVTDLNWEDLGRAWGLLRLPKMPELKNFTGDRLLGVEGMDWDNYAYKDKQRERRR
REELNERANTADGIASNAKRPFKRPATRSESIPWSQNLKKRSEKESRRERKKARRDRELW
SKMTEDERNKVRETERMVDAVRKAVRNQSGLQTSDALEEEFEGFD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggctccagctatttctcaaaattcaaagttgagggcatgggatgctctcactcctcct
ctatcgggatggattcttgatgccatctcgtccatgggcttctcccgcatgacgccagtg
caggcttcaactattcctctttttatagcgcataaggatgtagttgtcgaggctgttacc
ggcagcgggaaaacattggcgtttttgatccccatggttgaaaggctcttacgacttgat
tctcctattaaaaagcaccatatcggagcaataatcatttcccccactagagaactggct
actcaaatatacaatgttttgcagtccctcttagcatttcacggtccttctgcgacctgt
ttacaatctgcggagaacggcattggcgaacagaatgaatccaatccaccgccgccatac
ccttcttccgtgttgaaaatagttccccagctgctgttaggtggcactaccactcccgca
caagatctaagtacatttttaaaacagtcacccaacgttctcatctcgacacctggccgc
cttctcgagctgctagcttccccccatgtgcattgccctcaatcttcgtttgaggttctt
gtccttgatgaagcagatagactcctagatttaggcttccaagaagatctacaaaagatt
cttcaacggttaccaaaacaacgacggaccgggctattcagtgccagcgtcagcgaagct
gttgatcagatagtccgcgttggcctgcggaaccctgtcaaaatttcggtcaaggtgaaa
ggtgcagggtctgaagacaaacgaactccagcgagtttacaaatgacctacctcctcacc
ccgcccccccacaaactcccagccgttaaaaaaatcctctcatccctccacccttccccc
cagaaatccattatctacttctccacctgcgccgcagtagactattttcaagacatcctc
tcttccatccttcctgaacaattcgagacaattccccttcacggcaagcacccatcccaa
gtccgccaaaaaaactttgcccgctttgtccactctatagcctcctccatccttttaaca
acagacgtcgcagcccgcgggcttgacattccttctgtagatttagtaatccaaatagac
ccccccactgacccaaaggctttcctccatcgctgtggacgcgcaggtcgcgcaggacgc
cggggcctcagcatcatcttactccacccaggccgggaagaagattacatctcgttcctc
aacgtgcgcaagacaccagtgacggcataccaatgccaatcctcaccgatctgcatatct
gacgaagacgcgacgaacgctacggagacaatccggaagcttgtccgacgggaccgcgcg
atccatgacaaggcacaaaaggccttcgtcagctgggtgaggagctacagcaagcaccaa
gctagcagcattttccgtgttacggacctgaattgggaagatctgggacgggcatggggt
ctattgcgcttacccaagatgcctgaattgaagaattttactggagatcgacttttaggg
gtggaaggaatggactgggataattatgcgtataaggataagcagagggagaggcgtcga
agagaggagctaaatgaacgggctaatactgctgatggtattgcttctaatgctaagagg
ccttttaaaagaccagctacacgcagtgaatctattccatggagccagaacctgaagaag
agaagtgagaaggagagcagacgagagcggaagaaagctaggagagatcgtgaactatgg
agcaaaatgacggaggacgagagaaacaaagtacgagagacagaacgtatggtggatgcc
gttcgaaaggctgtaaggaatcaatctggacttcagacgagtgatgctttggaagaggaa
tttgaggggtttgattag
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