KEGG   Paracoccidioides brasiliensis: PADG_00848
Entry
PADG_00848        CDS       T03549                                 
Name
(RefSeq) DNA-directed RNA polymerase core subunit RPB5
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03020  RNA polymerase
pbn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PADG_00848
  09124 Replication and repair
   03420 Nucleotide excision repair
    PADG_00848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbn03021]
    PADG_00848
   03400 DNA repair and recombination proteins [BR:pbn03400]
    PADG_00848
Transcription machinery [BR:pbn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PADG_00848
  RNA polymerase III system
   RNA polymerase III
     PADG_00848
  RNA polymerase I system
   RNA polymerase I
     PADG_00848
DNA repair and recombination proteins [BR:pbn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PADG_00848
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat NA-iREase1
Other DBs
NCBI-GeneID: 22580623
NCBI-ProteinID: XP_010756006
UniProt: C1FYH2
LinkDB
Position
Unknown
AA seq 259 aa
MADEEYSRASAEADREMTKLWRTWRTVFEMLADRVWAYPSSRVIDMQLLTRGGDYVQGYE
VTEEEIKIPLEEFRTRYSDALGFPDRNKMKISARPSQAMMEKYTPLPTVSKPNPVPECGT
IYVEFCADIQSVGTKQVRAFNHFIDEQNYHTGIFISQTPISPSAMRVLNSIPGRFCEHFQ
EQELLVNITHHELVPKHILLSAEEKKRLLQRYRLKESQLPRIQSGDPVAKYLGLRRGQVV
KIIRKSETAGRYASYRWVT
NT seq 780 nt   +upstreamnt  +downstreamnt
atggctgatgaggaatactcgagggcgtctgcggaagcagaccgtgaaatgacaaagctc
tggcgcacatggaggaccgttttcgagatgctagctgatcgggtatgggcctatccctca
tctcgcgtaatcgatatgcagctgctgacgcgtggtggggactatgttcagggctatgaa
gtgactgaggaggagataaaaattcctctcgaagaattcagaacgcgatactcagatgct
cttgggtttcctgatcgcaataaaatgaaaatcagcgcgcgtccctcacaggcgatgatg
gagaaatacacacccctccccacagtatcgaaacctaacccagtccccgaatgcggtacc
atttacgtcgaattctgcgccgatatacagagcgtagggacaaagcaagtgcgcgcattt
aatcatttcatcgacgaacaaaactaccacaccggaatattcatcagccagacgccaatt
tctccatccgcaatgcgagtgttgaacagcataccaggccggttctgtgagcacttccag
gaacaggaactcctagtcaatattacccatcatgaactcgtacccaaacatattcttcta
agcgcagaggaaaagaaacggctccttcagcgataccggttgaaggagtctcagcttcca
cgtatccagagtggagatcctgtggcgaaatatctaggtttgcgacgagggcaggtggtc
aagatcatccgaaagagtgaaacagctggaaggtacgccagctaccgctgggttacttaa

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