Paracoccidioides brasiliensis: PADG_01232
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Entry
PADG_01232 CDS
T03549
Name
(RefSeq) TFIIH/NER complex subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03022
Basal transcription factors
pbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PADG_01232
09124 Replication and repair
03420 Nucleotide excision repair
PADG_01232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbn03021
]
PADG_01232
03400 DNA repair and recombination proteins [BR:
pbn03400
]
PADG_01232
Transcription machinery [BR:
pbn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PADG_01232
DNA repair and recombination proteins [BR:
pbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PADG_01232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
22580938
NCBI-ProteinID:
XP_010757367
UniProt:
C1G2R6
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAVSSSRSMDYLESLPGTVFRRLYQQPSTALAIFRRMLPYLAKCFVMALLYLKDPLPAAD
LELWVKSESKRERDNALSILGRLHILSNATTTDHVRAYVVTEPFASSLRQALTGGDKQQS
FGVPSVTPDANLMTVAQLDEYASRQWEGVLGYMVGTSVLGAQQTVTLSKGVKQLLQACHL
VEVHDRRVDITKEGFAFVLQDVNTQVWNILILYVENAEQIGLESVEVLSFLFVLSSLELG
QSYEKKHLTSTQLKTLTDLTDFGIVYQHFPPQEATRFYPTRLVTTLTSDSATLGSSISTS
LTGPSGPAAANSSEPSTGFIVIETNYRLYAYTSSPLQISLIALFTTLKYRFPNLITGKIT
RQSIRRAVEMGITADQIISYLTTHAHPQMRKYHASKSSHTVGAPAVLPPTVVDQIRLWQL
ERDRIKATPGFLFKDFVSLAEFDGPCRYAEEIGVLVWKSEKRRMFFVTRHEQVAAYLRSR
AGKS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtcgtcttcccgctcgatggactatctggagagtttgccaggaaccgtcttc
cgcagactgtaccagcagccatccacggctctagctatcttccggcgaatgttgccgtac
ctggcgaaatgtttcgtcatggcacttctctatctgaaggatccacttcctgctgcggat
cttgaactatgggtgaagtcggagagcaaacgtgagagagataatgcattgtcgatattg
ggtcgactccatatcctctcaaatgccactaccacggatcatgttagagcatacgtggta
acggagccgttcgcatcgtcgcttcgacaagccctcacaggaggagataagcagcaatct
ttcggagtaccatctgtaaccccggatgcaaatcttatgactgttgctcagctggacgaa
tatgccagtcgccagtgggaaggcgttttagggtacatggttgggacgagcgtcttagga
gcccagcaaacagtcacattaagcaagggtgtgaaacagctccttcaagcctgccatctg
gtggaagtccatgaccgcagagtcgatattacaaaagagggcttcgccttcgtcctacaa
gacgtcaacacccaagtttggaacatcttaatcctctacgtcgaaaacgccgaacagata
ggcttagaaagtgtcgaggtcctctcattcctcttcgtcctcagcagcctagagctcggg
cagtcgtatgagaagaaacacctcacatccactcaactcaagactctcacggacctcacc
gatttcggaatagtatatcaacacttccccccacaagaagcaacccgtttctaccccacc
aggctcgtaacaactcttacttctgactccgctacactcggaagctccatatccaccagt
ctcacaggcccaagcggtcctgctgccgcgaactccagcgaacccagcaccggcttcatt
gtcatcgaaaccaactaccgcctatatgcctacacatcttcccccctgcaaatttctcta
atcgccttattcacaactctaaaataccgcttccccaaccttatcacaggaaaaataacg
cgccaatccatacgacgcgccgtcgaaatgggaatcactgcagaccagataatctcttac
ctaactacccacgcccatccgcaaatgcgcaagtaccacgcatcaaaatcctcccatacc
gttggcgcccccgctgtgctcccgcccacagttgtagaccagatccgcctgtggcagttg
gagcgggatcgaataaaggcgacgccaggtttcctttttaaagactttgtcagtctggca
gagttcgatgggccgtgtaggtatgcagaggagattggggtgttggtgtggaagtctgag
aagcggcgaatgttttttgtcacgaggcatgagcaagttgcggcgtatttgaggagcagg
gctgggaagagctaa
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