Paracoccidioides brasiliensis: PADG_01820
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Entry
PADG_01820 CDS
T03549
Name
(RefSeq) uncharacterized protein
KO
K12880
THO complex subunit 3
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03013
Nucleocytoplasmic transport
pbn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PADG_01820
09122 Translation
03013 Nucleocytoplasmic transport
PADG_01820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_01820
03041 Spliceosome [BR:
pbn03041
]
PADG_01820
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
PADG_01820
Spliceosome [BR:
pbn03041
]
Complex C
Other components
EJC/TREX
PADG_01820
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PADG_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Cytochrom_D1
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IFT122_1st
Tricorn_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_Nup120_160
eIF2A
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
22581414
NCBI-ProteinID:
XP_010757086
UniProt:
C1G4F4
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MAVRKLPNSGSTATPDGSFIRNEHVQALPTKLGLRPADSVVEELGLWPSVNMPPAPTRRM
VPKDRFGHFFGSLKVQPYYDPAARGPGSHTIRTLAWNPTGSLIATGSVDRTLRIWNPERT
HVKYSTELRGHSAGIEKVAFNPVKESELASCSSDSTVRFWDVRTKTCISRVDVGGEAFTM
TWAADGSVVLVGRKVRSPSTCVYVAVSLDDTLIPISVESPSTPTFQIATGTSAPTSTFKA
LTPHQQSVQTNAATFSHSFNTSDLDLFLTTGDGTVKVVSYPSFAPLHTIHAHTSACLSIA
LSPTSRYLAVGGSDALISLWDTTDWFCKRTVSSANGGAVRGVSWSWDGRFIVGACDEPGC
GGSGLEIFHAETGESVYTIPTGGGLGANSGVNGITGSTSGSGVAVGVPAVAWHPSRYWLA
YSVTADSMGSNSGGGLRIVGAGSSAPL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcgaaaactgcccaactccggttccaccgcaacacccgacggctcttttatt
cgcaatgagcatgtccaagcccttcctacgaaactaggactgcgccccgccgacagtgtt
gttgaggagcttgggctgtggccatcagtcaatatgccgccagccccaacccgtaggatg
gtgccgaaggaccgtttcggccactttttcggtagcttaaaagtgcagccttattatgat
ccagcggcgcggggtccgggttctcatactatccgaacacttgcgtggaacccgacaggc
agcttgatcgccactggctctgtggatcgcaccctacgcatttggaaccccgagcgcaca
catgtcaaatactcgacggagcttcgtgggcattcagccggtatagagaaagtggctttc
aaccccgttaaggaatcggagttggcaagttgttcgagcgatagcacagttcgtttctgg
gatgtgcgaaccaagacttgtattagccgcgttgatgtgggaggagaggcctttacgatg
acatgggccgctgatggaagcgtggttctagtgggtagaaaagttcgttcacccagtact
tgcgtatacgtagccgtttcacttgatgacactttgatacccatctcagtcgaatcgcca
tctactccaactttccaaatagccactggcacctccgccccaacaagcactttcaaagct
ctaaccccgcaccagcaatctgtccaaacgaacgcggcaaccttttcacactccttcaat
acgtctgatctggacctcttcctcacaaccggcgatggcaccgtaaaagtcgtctcctac
ccctctttcgcacctctccatacaatccacgcgcatacatctgcctgcctttcaatcgct
ctcagccctacgtctcgatacctagcagttggcggcagcgacgctcttatctcgctctgg
gatactacagactggttttgtaaacgaaccgtctcaagtgccaacggcggtgccgtgcgg
ggtgttagctggagctgggacggtagatttatcgtcggcgcatgcgacgagcccggttgt
ggcggttccgggcttgaaatttttcacgctgaaacgggagaaagcgtatatactattccc
acgggtggcgggttgggtgctaactccggcgtgaatggaataactggaagcacgagcggc
tctggagtcgcggtaggagttccggcggtcgcatggcatccgtctcggtattggcttgct
tattctgtcaccgctgatagcatggggagcaatagtggcggtggtttgaggattgtgggg
gcggggagcagcgctccattgtga
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