KEGG   Paracoccidioides brasiliensis: PADG_01820
Entry
PADG_01820        CDS       T03549                                 
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03013  Nucleocytoplasmic transport
pbn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PADG_01820
  09122 Translation
   03013 Nucleocytoplasmic transport
    PADG_01820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbn03019]
    PADG_01820
   03041 Spliceosome [BR:pbn03041]
    PADG_01820
Messenger RNA biogenesis [BR:pbn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     PADG_01820
Spliceosome [BR:pbn03041]
 Complex C
  Other components
   EJC/TREX
    PADG_01820
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PADG_01820
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta WDR55 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_TEP1_2nd Cytochrom_D1 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_IFT122_1st Tricorn_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_Nup120_160 eIF2A Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_NOL10_N Beta-prop_WDR41
Other DBs
NCBI-GeneID: 22581414
NCBI-ProteinID: XP_010757086
UniProt: C1G4F4
LinkDB
Position
Unknown
AA seq 447 aa
MAVRKLPNSGSTATPDGSFIRNEHVQALPTKLGLRPADSVVEELGLWPSVNMPPAPTRRM
VPKDRFGHFFGSLKVQPYYDPAARGPGSHTIRTLAWNPTGSLIATGSVDRTLRIWNPERT
HVKYSTELRGHSAGIEKVAFNPVKESELASCSSDSTVRFWDVRTKTCISRVDVGGEAFTM
TWAADGSVVLVGRKVRSPSTCVYVAVSLDDTLIPISVESPSTPTFQIATGTSAPTSTFKA
LTPHQQSVQTNAATFSHSFNTSDLDLFLTTGDGTVKVVSYPSFAPLHTIHAHTSACLSIA
LSPTSRYLAVGGSDALISLWDTTDWFCKRTVSSANGGAVRGVSWSWDGRFIVGACDEPGC
GGSGLEIFHAETGESVYTIPTGGGLGANSGVNGITGSTSGSGVAVGVPAVAWHPSRYWLA
YSVTADSMGSNSGGGLRIVGAGSSAPL
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggcggttcgaaaactgcccaactccggttccaccgcaacacccgacggctcttttatt
cgcaatgagcatgtccaagcccttcctacgaaactaggactgcgccccgccgacagtgtt
gttgaggagcttgggctgtggccatcagtcaatatgccgccagccccaacccgtaggatg
gtgccgaaggaccgtttcggccactttttcggtagcttaaaagtgcagccttattatgat
ccagcggcgcggggtccgggttctcatactatccgaacacttgcgtggaacccgacaggc
agcttgatcgccactggctctgtggatcgcaccctacgcatttggaaccccgagcgcaca
catgtcaaatactcgacggagcttcgtgggcattcagccggtatagagaaagtggctttc
aaccccgttaaggaatcggagttggcaagttgttcgagcgatagcacagttcgtttctgg
gatgtgcgaaccaagacttgtattagccgcgttgatgtgggaggagaggcctttacgatg
acatgggccgctgatggaagcgtggttctagtgggtagaaaagttcgttcacccagtact
tgcgtatacgtagccgtttcacttgatgacactttgatacccatctcagtcgaatcgcca
tctactccaactttccaaatagccactggcacctccgccccaacaagcactttcaaagct
ctaaccccgcaccagcaatctgtccaaacgaacgcggcaaccttttcacactccttcaat
acgtctgatctggacctcttcctcacaaccggcgatggcaccgtaaaagtcgtctcctac
ccctctttcgcacctctccatacaatccacgcgcatacatctgcctgcctttcaatcgct
ctcagccctacgtctcgatacctagcagttggcggcagcgacgctcttatctcgctctgg
gatactacagactggttttgtaaacgaaccgtctcaagtgccaacggcggtgccgtgcgg
ggtgttagctggagctgggacggtagatttatcgtcggcgcatgcgacgagcccggttgt
ggcggttccgggcttgaaatttttcacgctgaaacgggagaaagcgtatatactattccc
acgggtggcgggttgggtgctaactccggcgtgaatggaataactggaagcacgagcggc
tctggagtcgcggtaggagttccggcggtcgcatggcatccgtctcggtattggcttgct
tattctgtcaccgctgatagcatggggagcaatagtggcggtggtttgaggattgtgggg
gcggggagcagcgctccattgtga

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