KEGG   Paracoccidioides brasiliensis: PADG_01936
Entry
PADG_01936        CDS       T03549                                 
Name
(RefSeq) pre-mRNA-splicing factor prp46
  KO
K12862  pleiotropic regulator 1
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PADG_01936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pbn03041]
    PADG_01936
   03400 DNA repair and recombination proteins [BR:pbn03400]
    PADG_01936
Spliceosome [BR:pbn03041]
 Complex B
  Other components
   Prp19 complex
    PADG_01936
 Complex C
   Prp19-CDC5 complex
    PADG_01936
DNA repair and recombination proteins [BR:pbn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    PADG_01936
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_IFT122_1st Beta-prop_WDR75_2nd WDR54 KNTC1_N WD40_like Beta-prop_DCAF12 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 22581509
NCBI-ProteinID: XP_010757643
UniProt: C1G4S0
LinkDB
Position
Unknown
AA seq 454 aa
MEATLAPPPPDQVVRNSAKRTRDLFGADYFLPSGFTKPGESIGVSYRRKTEYYDVQTLPP
ALAEKQAKAVAGRTKRRNGAATGTGTAVGAGSSTALVKSSPAGGTQQSGGENMPTSLVRR
PMVSQQPKPEWHAPWKLMRVISGHLGWVRSLTVEPNNQWFASGAGDRTIKIWDLASGSLR
LTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLDLHPT
LDVLVTGGRDAVARVWDMRTRSNIHVLSGHRTTVSDLKCQEADPQVITASLDSTVRLWDL
ASGKTMNVLTHHKKGVRALAVHPKEFTFASASAGSIKQWKCPEGAFMQNFDGHNAIINNL
AVNEDNVLFSGGDNGSMSFWDWKTGHRFQSLDTTAQPGSLDAEAGIMAATFDRTGLRLLV
GEADKTIKIWKPDDEATEETHPLVWKPTLGRQKY
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaggctactttagcacctcctccacctgatcaggtggttcgaaattccgcaaagcgg
acccgcgatctgttcggtgcagattactttttgccgtcgggattcacgaaacctggcgag
tccataggagtgtcatatcggcggaagacagagtactatgacgtgcaaacactccctccc
gcccttgctgaaaagcaggcaaaagccgtcgcgggaagaacgaaacgaaggaatggtgct
gcgactgggactgggaccgcggtgggtgctgggtcttcaacggccctggtgaaatcttcg
ccagcaggtggcacgcaacaatctggtggagaaaatatgcctacaagtcttgtaaggcgg
ccaatggtgtctcaacagccaaaaccagaatggcacgcaccttggaaacttatgcgggtg
atatcaggacacttgggatgggtccgcagtttgacagtggaacctaataatcagtggttt
gcaagtggtgcgggagatagaacgatcaaaatctgggatctggcatctggtagccttcga
ttgaccctcactggccacatatctactgtgagagggttggctgtttctcctcgacatcca
tatcttttctcatgcggtgaggataagatggtcaaatgctgggatctagaaacgaacaag
gtcatccgccactaccacggccatctaagtggagtctacacactcgatttacatcctacc
ttggacgttctcgtaacgggagggcgagatgctgtagcaagagtctgggacatgcgaacg
cgaagcaacatccacgttctttcaggacacagaacaaccgtgtcagatctgaaatgtcaa
gaagccgacccacaagtcatcaccgcctccctcgactcaactgtacggctatgggatctc
gcctcaggcaagaccatgaacgtccttacgcaccacaagaaaggcgttcgtgcccttgca
gtccatccaaaggaattcacatttgccagcgccagcgcaggaagcatcaaacagtggaaa
tgccccgaaggtgccttcatgcaaaattttgatgggcacaatgctatcatcaacaatctg
gcggtgaatgaggataacgtattattttccgggggtgataatggctccatgtctttctgg
gactggaagacgggccatcgattccagtctctggacacgacagctcaacctggctcgctg
gatgctgaagctggtattatggccgctacgtttgaccgtacgggcttgcggttgcttgtt
ggggaggcggataaaactatcaagatctggaagccggatgatgaggctacggaggagaca
catccgttggtttggaagccgacattggggagacaaaaatactaa

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