Paracoccidioides brasiliensis: PADG_02464
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Entry
PADG_02464 CDS
T03549
Name
(RefSeq) RNA-processing protein PTA1
KO
K06100
symplekin
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PADG_02464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbn03021
]
PADG_02464
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_02464
Transcription machinery [BR:
pbn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PADG_02464
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PADG_02464
U7-dependent histone pre-mRNA processing factors
PADG_02464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
22581940
NCBI-ProteinID:
XP_010757999
UniProt:
C1G5K9
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MALPLDNLVEQMTQLDTARNVVLGDAALYPQIVQGILPIIGAKARLELRRWGAEFLAETF
ASPALAQRPKEKLSTQVIQTLWDLLKNPDEDASVVRGIIQTAASIYPLIFRTIVDNPTED
ALWEKMTAIKQNILKRWDTAPNNIKVCCIKFVQKVVQVQTAGVISDPRLPEKNEISLSLV
PRNHPLVPLPNLEAEASGLLDRLLNVFYENSSDPILVNATLNCLPVLIRTRQSISNKIVN
AILNFNPLKQANAPMSPTIRVNIKSVERTTRALLLNIMKRNTNHPLAGRIQQYLDRLAQS
RNDIFDETSKKRPLPTEPTDLVDSAKRARLGVDTPPQLKIPPLPPGPNSFSQLFTLTDDA
GLTSFDVKQLAADLIVNITIPVLSRVDPEALDQAVGAVRSRYLTLSKKQIFDHQASQAAA
QPAAEEDDDDYEPEYQPMDIPTDSQALEGPDASKIDENAPELVALGPFVLPQPPPLSGEE
ATEIGKGAIERVFGMISTLEQPSKSFKGSQKPGFGRLAASTFDRDSWLILLTRLATRASA
GLDVDEADNIVKTESGRQSHSKQRMSMADGIREMLYRYVLEDFRVRINVAISWMNEEWYN
DRIQLKHCSSENNGDIDDTIVPRHYEKWVMRLLEGILPYLDARDKVLIRFLSEIPELSLE
LVKKTKSLANDPERVTLCVQALYYLVLVRPPARDLCLDALQDLYGKIEEARPLIAKLLLK
WRPHVIPKPEEPVSKPKSTSTNSTSTAPPGAEQSGNVPLNPSNGIKSEPDAGGIVNIQNH
GIKAFPESISNSASNDAHIHQQQYVKGTGDSVTPSMTSTPVPSQNASVAE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggccctgccactcgacaacctcgtggagcagatgacccagctggacactgcgaggaat
gtcgttcttggcgatgctgctttgtatccgcaaatcgttcagggtatacttccaataata
ggtgcaaaggcacggctggaactacgaagatggggtgccgaattcctagcagaaacgttt
gcgagtcccgcgctggcccaacgaccgaaagagaagttgagtacacaggtgatacagacc
ttgtgggatctgttgaagaatccggatgaggatgccagtgttgtaagaggcattattcaa
actgctgcgagtatttacccgttgatatttagaactatcgtcgataaccccacggaggat
gcgttatgggagaaaatgacagcaatcaagcaaaatattctaaaacgatgggatactgct
cccaataacatcaaggtttgctgtatcaaattcgtccagaaggtggtgcaagtccaaaca
gcaggtgtcatatcagatccaaggctccctgagaaaaatgaaatctctctatcgcttgtg
ccgagaaatcaccctctcgtaccgctacctaatctcgaagctgaggcatccggattgtta
gatagacttcttaacgttttctatgaaaattctagtgatcctatcttggtgaatgcgact
ctaaattgccttccggtcctgatacgcacccgccagtcaatttcaaataagattgtaaat
gcgattcttaacttcaaccctcttaaacaagcaaatgcaccaatgagtcccaccattcga
gtaaatatcaagtccgtggaacggaccacgagggcattgctcctcaatataatgaaaagg
aacaccaaccatcctttggctgggcgtatacagcagtatttagatcgtttagcgcaatcc
cgaaatgatatcttcgacgaaacatcgaagaaaaggccgctaccaactgagccaaccgat
cttgtcgatagtgcaaagcgtgcaagacttggagtcgatacgccgcctcagctaaagatt
ccgcctctcccccccggccctaatagtttctcacagcttttcacattgacagacgatgca
ggattgacgtcgtttgacgtcaagcagctagcagcagacctaattgtcaatatcactatt
cctgtgttgagtcgcgtggatcctgaggcgttggatcaagctgttggggctgttcgatct
cgatacctcacattatccaagaagcaaattttcgaccatcaagcttctcaggctgccgct
cagccagctgccgaagaagatgatgatgattatgaaccagaataccaaccaatggatata
cctaccgattcacaggcattagagggacctgacgcgtctaaaattgacgagaatgcaccg
gaactcgttgctctaggtccatttgtactccctcagcctccaccattatcaggagaagag
gccactgaaattggcaagggcgcaattgaaagagttttcggaatgatttccaccttggag
caaccgtcaaaatcattcaagggttctcagaagccaggcttcgggagattggctgcaagc
acattcgatcgggactcttggttaatcttgcttactcgattggcaactcgtgcgtcggct
ggtttagatgtggacgaagcagacaatattgttaaaaccgaaagcggccgacagtcgcac
tcgaagcagcgcatgagcatggctgatggcatcagggagatgctttaccgatacgttctt
gaagatttccgggttcgaatcaacgttgctatttcttggatgaatgaggagtggtataat
gaccgaatacaattaaagcactgttcatcagagaataatggtgatattgatgacacgata
gtcccgaggcactatgaaaaatgggtcatgaggctactggaaggaatactaccttattta
gacgcgagagacaaggtgctcattagatttttaagtgagatacccgaactgagtctcgag
ctcgtgaagaaaacaaagagtttggcaaatgaccctgaacgcgttactctatgtgttcag
gcactttactacctcgtcctcgtacggcctcctgcaagggatctttgcttagatgctctc
caagacctgtacggaaaaatcgaagaagcccgccctctgattgcaaaacttctcctcaag
tggcgaccacatgtcattccaaaaccagaggagcctgtatcaaaacctaaatccacatct
acaaactccacatccactgctcctccaggtgctgagcaaagtggaaacgttcccctgaat
ccatctaacgggataaaatcagagccagatgcagggggcattgtcaatattcaaaaccat
ggcattaaagcttttcctgaatcgatttctaattcagcatcgaacgacgcccatatccat
caacaacagtatgtgaaaggcaccggcgattcggtcacaccgtcaatgacaagcactccc
gtcccttctcaaaatgcttctgtcgctgaatga
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