KEGG   Paracoccidioides brasiliensis: PADG_02464
Entry
PADG_02464        CDS       T03549                                 
Name
(RefSeq) RNA-processing protein PTA1
  KO
K06100  symplekin
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PADG_02464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbn03021]
    PADG_02464
   03019 Messenger RNA biogenesis [BR:pbn03019]
    PADG_02464
Transcription machinery [BR:pbn03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     PADG_02464
Messenger RNA biogenesis [BR:pbn03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     PADG_02464
    U7-dependent histone pre-mRNA processing factors
     PADG_02464
SSDB
Motif
Pfam: SYMPK_PTA1_N
Other DBs
NCBI-GeneID: 22581940
NCBI-ProteinID: XP_010757999
UniProt: C1G5K9
LinkDB
Position
Unknown
AA seq 830 aa
MALPLDNLVEQMTQLDTARNVVLGDAALYPQIVQGILPIIGAKARLELRRWGAEFLAETF
ASPALAQRPKEKLSTQVIQTLWDLLKNPDEDASVVRGIIQTAASIYPLIFRTIVDNPTED
ALWEKMTAIKQNILKRWDTAPNNIKVCCIKFVQKVVQVQTAGVISDPRLPEKNEISLSLV
PRNHPLVPLPNLEAEASGLLDRLLNVFYENSSDPILVNATLNCLPVLIRTRQSISNKIVN
AILNFNPLKQANAPMSPTIRVNIKSVERTTRALLLNIMKRNTNHPLAGRIQQYLDRLAQS
RNDIFDETSKKRPLPTEPTDLVDSAKRARLGVDTPPQLKIPPLPPGPNSFSQLFTLTDDA
GLTSFDVKQLAADLIVNITIPVLSRVDPEALDQAVGAVRSRYLTLSKKQIFDHQASQAAA
QPAAEEDDDDYEPEYQPMDIPTDSQALEGPDASKIDENAPELVALGPFVLPQPPPLSGEE
ATEIGKGAIERVFGMISTLEQPSKSFKGSQKPGFGRLAASTFDRDSWLILLTRLATRASA
GLDVDEADNIVKTESGRQSHSKQRMSMADGIREMLYRYVLEDFRVRINVAISWMNEEWYN
DRIQLKHCSSENNGDIDDTIVPRHYEKWVMRLLEGILPYLDARDKVLIRFLSEIPELSLE
LVKKTKSLANDPERVTLCVQALYYLVLVRPPARDLCLDALQDLYGKIEEARPLIAKLLLK
WRPHVIPKPEEPVSKPKSTSTNSTSTAPPGAEQSGNVPLNPSNGIKSEPDAGGIVNIQNH
GIKAFPESISNSASNDAHIHQQQYVKGTGDSVTPSMTSTPVPSQNASVAE
NT seq 2493 nt   +upstreamnt  +downstreamnt
atggccctgccactcgacaacctcgtggagcagatgacccagctggacactgcgaggaat
gtcgttcttggcgatgctgctttgtatccgcaaatcgttcagggtatacttccaataata
ggtgcaaaggcacggctggaactacgaagatggggtgccgaattcctagcagaaacgttt
gcgagtcccgcgctggcccaacgaccgaaagagaagttgagtacacaggtgatacagacc
ttgtgggatctgttgaagaatccggatgaggatgccagtgttgtaagaggcattattcaa
actgctgcgagtatttacccgttgatatttagaactatcgtcgataaccccacggaggat
gcgttatgggagaaaatgacagcaatcaagcaaaatattctaaaacgatgggatactgct
cccaataacatcaaggtttgctgtatcaaattcgtccagaaggtggtgcaagtccaaaca
gcaggtgtcatatcagatccaaggctccctgagaaaaatgaaatctctctatcgcttgtg
ccgagaaatcaccctctcgtaccgctacctaatctcgaagctgaggcatccggattgtta
gatagacttcttaacgttttctatgaaaattctagtgatcctatcttggtgaatgcgact
ctaaattgccttccggtcctgatacgcacccgccagtcaatttcaaataagattgtaaat
gcgattcttaacttcaaccctcttaaacaagcaaatgcaccaatgagtcccaccattcga
gtaaatatcaagtccgtggaacggaccacgagggcattgctcctcaatataatgaaaagg
aacaccaaccatcctttggctgggcgtatacagcagtatttagatcgtttagcgcaatcc
cgaaatgatatcttcgacgaaacatcgaagaaaaggccgctaccaactgagccaaccgat
cttgtcgatagtgcaaagcgtgcaagacttggagtcgatacgccgcctcagctaaagatt
ccgcctctcccccccggccctaatagtttctcacagcttttcacattgacagacgatgca
ggattgacgtcgtttgacgtcaagcagctagcagcagacctaattgtcaatatcactatt
cctgtgttgagtcgcgtggatcctgaggcgttggatcaagctgttggggctgttcgatct
cgatacctcacattatccaagaagcaaattttcgaccatcaagcttctcaggctgccgct
cagccagctgccgaagaagatgatgatgattatgaaccagaataccaaccaatggatata
cctaccgattcacaggcattagagggacctgacgcgtctaaaattgacgagaatgcaccg
gaactcgttgctctaggtccatttgtactccctcagcctccaccattatcaggagaagag
gccactgaaattggcaagggcgcaattgaaagagttttcggaatgatttccaccttggag
caaccgtcaaaatcattcaagggttctcagaagccaggcttcgggagattggctgcaagc
acattcgatcgggactcttggttaatcttgcttactcgattggcaactcgtgcgtcggct
ggtttagatgtggacgaagcagacaatattgttaaaaccgaaagcggccgacagtcgcac
tcgaagcagcgcatgagcatggctgatggcatcagggagatgctttaccgatacgttctt
gaagatttccgggttcgaatcaacgttgctatttcttggatgaatgaggagtggtataat
gaccgaatacaattaaagcactgttcatcagagaataatggtgatattgatgacacgata
gtcccgaggcactatgaaaaatgggtcatgaggctactggaaggaatactaccttattta
gacgcgagagacaaggtgctcattagatttttaagtgagatacccgaactgagtctcgag
ctcgtgaagaaaacaaagagtttggcaaatgaccctgaacgcgttactctatgtgttcag
gcactttactacctcgtcctcgtacggcctcctgcaagggatctttgcttagatgctctc
caagacctgtacggaaaaatcgaagaagcccgccctctgattgcaaaacttctcctcaag
tggcgaccacatgtcattccaaaaccagaggagcctgtatcaaaacctaaatccacatct
acaaactccacatccactgctcctccaggtgctgagcaaagtggaaacgttcccctgaat
ccatctaacgggataaaatcagagccagatgcagggggcattgtcaatattcaaaaccat
ggcattaaagcttttcctgaatcgatttctaattcagcatcgaacgacgcccatatccat
caacaacagtatgtgaaaggcaccggcgattcggtcacaccgtcaatgacaagcactccc
gtcccttctcaaaatgcttctgtcgctgaatga

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