Paracoccidioides brasiliensis: PADG_03988
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Entry
PADG_03988 CDS
T03549
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03018
RNA degradation
pbn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PADG_03988
09123 Folding, sorting and degradation
03018 RNA degradation
PADG_03988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbn03019
]
PADG_03988
03041 Spliceosome [BR:
pbn03041
]
PADG_03988
Messenger RNA biogenesis [BR:
pbn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PADG_03988
mRNA degradation factors
5'-3' decay
Lsm complex
PADG_03988
Spliceosome [BR:
pbn03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PADG_03988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
22583196
NCBI-ProteinID:
XP_010759672
UniProt:
C1G9Q2
LinkDB
All DBs
Position
Unknown
AA seq
94 aa
AA seq
DB search
MENGASEGKDPSAFLSEITGAPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVDGKLR
RSYGDAFVRGNNGIIHSTFQTSHAADYRGAFADV
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggcgcctccgagggcaaagacccctccgcatttctgagtgagatcactggc
gcccccgtcacagtcaagttgaattctggagtggtttacaaaggcgagctgcagtccgtc
gacggctatatgaacatcgccctagagaagacggaggagtatgtcgatggcaagctgaga
cggagctatggcgatgcgtttgtgaggggaaataatggtatcattcattctacatttcaa
acatcacatgccgcggattatagaggagcctttgctgacgtttaa
DBGET
integrated database retrieval system
