Paracoccidioides brasiliensis: PADG_04401
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Entry
PADG_04401 CDS
T03549
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PADG_04401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pbn03041
]
PADG_04401
Spliceosome [BR:
pbn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PADG_04401
Complex C
U5 SnRNP specific factors
PADG_04401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Hom_end_hint
Hom_end
Motif
Other DBs
NCBI-GeneID:
22583531
NCBI-ProteinID:
XP_010759829
UniProt:
C1GAW5
LinkDB
All DBs
Position
Unknown
AA seq
2926 aa
AA seq
DB search
MASLPPPPPPGWGAASPPSMPLAPPPPGYRPPADPLVAKFAQKKNEWLRTQRNRFGEKRK
TGFVETQKADMPPEHLRKIVKDIGDVSQKKFSTDKRSYLGALKFMPHAVLKLLENMPMPW
ESAREVKVLYHVNGCLTLVNEIPRVIEPVFHAQWATMWMTMRREKSDRRHFKRMRFPPFD
DEEPPLSWSENIEDVEPLEPIQMELDESEDAPVFEWFYDHRPLLDTPHVNGPSYKEWNLT
LPQMATLYRLSRQLLSDVVDKNYFHMFELNSFLTAKALNVAIPGGPRFEPLYKDVDPNDE
DFGEFNAIDRIIFRAPIRTEYRVAFPYLYNSLPRSVKLSWYSHPQIVYVRSDDPNLPAFY
FDPVINPISSRSVAPKNITVSHEDQIFGLGNDEDEFTLPANAEPFLADEELYTSETASAI
ALWWAPYPFDRRSGKMVRAQDVPLVKQWYLEHCPQGQPVKVRVSYQKLLKTYVLNELHKK
KPKAQSKQNLLRTLKGTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYNF
NLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGILYAF
NHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWAPAWRVWLFFLR
GIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDMMPEGIK
QNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWISVAHYNRERIR
RGATVDKTVAKKNLGRLTRLWLKAEQERQHNYLKDGPYVSSEEAVAIYTTTVHWLESRKF
SPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAYDSPGTTLARIK
RFLLTQRAFKEVGIDMNDNYSNINPVYDIEPIEKITDAYLDQYLWYQSDQRHLFPAWIKP
SDSEVPPLLTYKWAQGINNLSNVWNTADGECNVMIETELSKVYEKIDLTLLNRLLRLIMD
HNLADYITSKNNVQLNYKDMNHTNSYGMIRGLQFSGFVFQYYGLVIDLLLLGLQRASEIA
GPPQSPNDFLQFRDRATETRHPIRLYTRYIDKIWVFLRFSADESRDLIQRFLTEQPDPNF
ENVIGYKNKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSITTIEWDDTFASVYSKDN
PNLLFSMCGFEVRILPKIRNQNDEFPVKDSVWSLADNTTKERTAYAFLQVTEEDIQKFNN
RIRQILMSSGSTTFTKIANKWNTSLIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKIG
LNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPTSDKRWSKQTDTGVTHYRAGMSHDEE
TLIPNIFRYIIPWEAEFTDSQRVWMEYSQKRQEANQQNRRLTLEDLEDSWDRGLPRINTL
FQKDRSTLSFDKGFRTRTEFKTYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGGVE
TILEHTLFKATAFPSWEGLFWERACLAKGTLLLRYDGTKVEVENVREGDLLLGPDGGPRR
AFNIVGGRDRLYRIKMEGGKEDLVVTPNHILVLHREKRDGVDKVYARPFALPLLQEDATD
DGEDLSEISAIEHFDTMEITAADFASLDPNERKLYRLFTSPGYELNGKPVPIDPYFLGLW
LGDRSRTKSSIYTNHEEEIREFIADHAAELDLQLVSYVSNRPSLAAMKNGNQLPLRHQAR
QTIRKQRIAAKSITQPGGARSSSYPATNGGLSSNTVTSLHSRERHPLSESSAVATMNLLP
RSTSVSTSVAAQPKSSMSTFITDAILPSESSNISVISDSGIEISKSNKVLSEEEADLDLF
DIDSEDEEIEDLDEKKNVSIVDEFPKRRRIHYLRTGCRTYGELCPGEEDQILEDIVGRPD
GTTSVESLLLALEALGLHTCGTNDSGSDKKRIPSVYMKNSRAVRLALLAGLIDSGGWYVD
SENTFGFSQTEDSNSTLIWDVVTLARSLGFSVSTKRRMTHKPTRTQHKAQEFAQISGNVA
EIPSLLARERGVERPISQAHSFKIKDIQLETEATEWAGFRVDQDQLYLRHDFLVLHNSGF
EESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTL
KISLIQIFRAHLWQKIHESVVMDLCQVFDQELEQLGIETVQKETIHPRKSYKMNSSCADI
LLFATHKWNVTRPSLLFDTKDVIEPTTTNKFWLDVQLRYGDYDSHDIERYVRAKYLDYTT
DSMSIYPSATGLMIGIDLAYNLYSAYGQYFPGLKALVQQAMAKIMKANPALYVLRERIRK
GLQLYASESNQEFLNSQNYSELFSNQIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFI
FNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLL
DPLEVHLLDFPNISIRASELQLPFQAAMKVEKLADMILRATEPQMVLFNLYDEWLKTISS
YTAFSRLILILRALHVNSDKTKILLRPDKMVITQEHHIWPTLSDEDWIKVEVQLRDLILN
DYGKKNNVNTQSLTSSEVRDIILGMEISAPSMQRQQAAEIEKQQDEQKQLTAVTTKTQNV
RGEEIVVTTTSQYEQQAFASKTEWRTRAIATSNLRTRANNIYISSDDIQEGHYTYIMPKN
VLKRFITIADLRVQVAGYLYGASPPDNDQVKEIRTIVMIPQVGNTRDIQLSHQLPQHEYL
NSLEPLGIIHTLSGNEPSYMTAMDVTQHARLMNAHSSWDKKTVTMTVAFTPGSVSLSAWA
LTPQGYKWGAENKDTSSDQPQGFSTSMGEKCQLLLSDKIRGYFLVPENNVWNYSFMGSSF
SNVEKRPVYVKIDTPLRFYDDQHRPLHFQNFAELEDIWVDRVDNFA
NT seq
8781 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcttccacctcctccacccccggggtggggagctgcatctcctccgtccatg
cctcttgctcccccacctcccggataccgtcctccggctgaccctctggtcgcgaaattt
gcacagaagaagaacgaatggctacggacacaacgaaaccgttttggggagaagagaaag
accgggtttgtggaaactcagaaggcagatatgccgccggagcatttacggaagattgta
aaggatataggagacgtatcgcagaagaagttcagcaccgacaaaagaagctacctgggg
gcattgaaattcatgccgcatgccgtgttgaagttgttggagaatatgccgatgccctgg
gagtctgctcgtgaggtcaaggtcctttaccatgtcaatggctgcttgacattggtcaac
gagattccccgagtcattgaacccgtctttcacgcgcaatgggctaccatgtggatgacg
atgcgacgggagaaaagtgaccggaggcatttcaaaagaatgcgttttccaccctttgac
gatgaggagccacctctgtcttggtcagaaaacattgaggatgtggagcccttggaaccc
atccagatggaacttgatgaatctgaggatgctcccgtctttgaatggttctacgatcac
cgcccactcctcgataccccacatgtcaatggacctagctataaggagtggaatttgacc
cttccgcaaatggcaacactgtatcgcttgagccgtcaactgctcagtgatgtagtagat
aagaattatttccatatgttcgaacttaacagcttcttgactgctaaggcccttaacgtc
gcaattcccggtggccccagattcgaaccgttgtacaaagacgtcgaccctaatgatgag
gattttggggaattcaacgcgatcgatcgtatcatcttcagagctcccatccgaaccgaa
tatcgcgttgctttcccatacctgtacaattctttacctcgcagtgttaagctgtcttgg
tactcccaccctcagatcgtatatgttcgatcagatgatcctaacctcccagccttttac
tttgaccctgtcattaatccgatatcctcccgctctgtcgcacctaaaaacataacggtt
agccacgaagatcagatattcgggcttggcaatgatgaggatgaatttacactcccagcg
aatgctgaacctttcttggcggatgaggaattgtacaccagtgaaaccgcttctgcaatc
gctctttggtgggctccctatccatttgaccgccgctcgggcaaaatggttcgggctcaa
gacgttcctcttgtaaagcagtggtatctggagcattgcccgcagggccagcctgtgaaa
gttcgagtatcttaccagaagcttctaaaaacttacgttctgaatgagttacacaagaaa
aaaccgaaggcacaaagcaaacagaatcttttgagaacactgaaaggcacgaaattcttc
cagcaaacaacaatcgattgggtagaggccggtcttcaagtctgtcgacaaggctttaac
atgttaaatttgctgattcaccgcaaaaatttgacctatctacatctcgattataacttt
aatttgaagcctgtgaagacgttgacgaccaaagagagaaagaaatcccgttttggaaat
gctttccatctaatgcgagaaatccttcgcttaacaaagctgattgttgacgcccaggtt
caatatcggttgggaaatattgatgcattccagctagctgacggtatcctctatgctttt
aaccacgttggccagctgactgggatgtacaggtacaaatacaagttgatgcaccagatc
agatcatgcaaggacttgaagcatctcatatactatcgtttcaattccggcccagttgga
aagggtcctggttgtggattctgggcacccgcctggagggtttggcttttcttcctaagg
ggaattattccgcttcttgaacgctggcttgggaatttgctatctcgtcaatttgaaggt
cgccatagcaagggtgtcgcgaaaactgttacaaagcaacgtgtcgaatcgcacttcgat
ctagaactccgcgcgtcagtcatggcggatcttatggatatgatgcccgaaggtattaaa
caaaataaagttaatactgttcttcaacatctttcggaagcgtggagatgctggaagagt
aacataccctggaaagttccgggccttccggctcccattgagaatatcattcttagatat
gttaagagcaaggcggattggtggatttctgttgcccattacaatcgagagcgaattcgg
cgcggtgcaacggttgataagactgtggctaagaaaaatctcggacgacttaccagactc
tggctcaaggctgagcaagagaggcaacataactacctgaaagacgggccctacgtctct
tctgaagaagcagtcgccatttatacgaccactgtccattggttggagtctcgcaaattt
tcccctatacctttcccgagcgtatcctacaagcatgatacgaaaatcttgattctggct
ctagaacgtttgcgtgaggcttactctgtcaagggtcgcttgaatcaaagtcaacgagag
gaacttgcgcttattgaacaagcttacgattctccaggcacaacactagcgagaattaag
cgattccttctcacgcagcgagcgttcaaggaagttggtattgatatgaatgacaactat
tccaatataaatccggtgtacgacattgaacccattgagaaaatcaccgatgcgtacctg
gatcaatacctctggtatcaatccgatcaacgccatcttttccctgcctggatcaaacca
tcagattctgaagtacctcctctcctgacttacaaatgggcccaaggcatcaacaacctc
tccaatgtttggaacaccgccgatggagaatgtaacgttatgatcgaaacggaactatcc
aaagtgtatgagaagatcgatctaacccttctcaaccgactgctgcgtctgatcatggac
cataacttggctgattacatcacctcgaaaaataacgttcagctcaattacaaggacatg
aatcatacaaacagctacggcatgattcgtggcctccagttctcaggctttgttttccaa
tattatggtctcgttatcgacttactcctgctgggcttgcaacgagcaagtgaaattgca
ggtcctccccagagtccgaatgatttcttgcagttcagagatcgtgcaactgaaacaagg
caccctatccgcctatacacaagatatattgacaaaatttgggtttttttgagattctcc
gccgatgaatcacgagatcttatccaaaggtttttgactgagcagccggatccgaatttc
gaaaacgttatcgggtataaaaacaaaaagtgttggccaagagattcaagaatgcggctg
atgagacatgacgttaacctgggtcgtgccgtcttttgggatctcaagaatcgccttcca
agatccatcaccactattgagtgggatgacacctttgccagtgtgtacagcaaagacaat
ccaaatctgttattctcaatgtgcgggtttgaggttcgcattttgcccaaaatccgcaat
cagaatgacgagttcccagtcaaggacagcgtttggtccttagcagataacacgaccaag
gaacgaacggcgtatgcatttttacaggttacggaagaagatatccagaagttcaacaat
cggataaggcagattctgatgtcttctggctcgactacatttaccaaaattgctaataag
tggaatacgagtctgatcgctctgttcacatattatcgggaagcagctgtatctaccgtc
aacctcttggatactattgttaaatgcgaaaccaaaatccaaacaagagttaagataggg
ttgaactctaaaatgccgtcccgtttcccccctgctgtgttctatacccccaaggaatta
ggaggtttaggaatgatttctggttctcacatacttattccaacgagcgataaacgatgg
tcgaagcaaactgataccggtgtcacccattaccgagctggtatgtcccatgatgaggag
accttgatccccaacatcttcaggtacattataccttgggaggcagaatttacagattcc
caacgcgtttggatggaatattctcagaaacgacaagaggcaaatcaacaaaatcgtcga
ttaactcttgaagatttggaagacagctgggatcgcggtcttccacgcatcaacactctc
ttccaaaaagaccgaagcacacttagctttgacaaaggcttccgtacgcgcactgaattc
aaaacatatcaattgatgaagagcaatcctttctggtggaccagtcaaagacatgatggg
aaactgtggaatcttaatgcctatcgaaccgatgttatccaagctctcgggggtgttgaa
acgattctggaacacacattgttcaaagccacagcgtttccttcatgggaaggcctgttc
tgggaaagagcctgccttgccaaggggactctgttactgcgatacgatggtaccaaggtc
gaagtcgaaaatgtgagagagggagacctgctgctcggtcccgatggtggccctcgtcgc
gcttttaacattgttggtggacgggatcgtctctatcgtatcaaaatggaggggggcaaa
gaagatctcgtggttactccaaaccatattctcgtccttcatcgagagaagagagacgga
gtggacaaagtatacgcccgtccatttgccctcccattattgcaagaagatgccacggac
gatggagaggatctgtccgaaatttcagcaatagagcattttgatactatggagattact
gcggctgattttgcttctcttgaccctaatgaaaggaaactgtatcgactttttactagt
cctggctacgaattgaacggcaaacccgtgcccatagatccatattttcttggactctgg
ctgggtgatagaagtcgcacgaaatcctcaatttataccaatcacgaagaagaaatccgg
gagttcatcgctgaccatgctgccgagttggacctgcaacttgtctcatatgtctccaac
cgaccatctctagcagctatgaaaaacggcaaccaattacctctccgtcatcaagcgcga
cagactatccgcaagcaacggatcgccgccaagagcatcacacagcctgggggcgctaga
tcatcgtcctacccggccacaaacggtggtctctcttccaacactgtaacctccctgcac
tcccgtgaacgtcatcctctatccgaatcgtcagcggtggctaccatgaatcttctaccc
agatctacgtctgtttctacttctgtcgctgctcagcctaagtcgagcatgtcaactttc
atcacggacgcgatccttccatcagagagctcaaacatttcagtcatctctgactcaggg
attgaaatatccaaatccaacaaagtgttatcggaagaggaagctgacctcgacttattt
gatatagatagtgaggacgaggaaatcgaggatctcgatgagaagaagaatgtcagtatc
gtcgacgaattccctaaacgtcgacggattcattacctgcgaactggttgtcgaacgtac
ggagagctgtgtcctggtgaggaggaccaaatccttgaagatatcgttggccgacctgat
ggcactaccagtgtagaatcgctcctgctggcgctcgaagcgttgggactacatacttgt
ggcacgaatgactctggatctgacaagaaacgtatcccttcggtatacatgaagaactca
cgagccgtccgacttgccctcctcgcaggactgatcgacagtggtggttggtacgttgat
tcagaaaacacgttcggcttcagccagactgaagactcaaactcaactcttatctgggat
gtcgtaacgttggcgcgctctttgggtttcagtgtttcgacaaagcggcgtatgacgcat
aaaccgacccgtacgcagcacaaagcccaagaatttgcccagatctctggaaatgtggcc
gaaattccaagcctcctcgcacgagagagaggagttgaacgtccaatttcccaagctcac
agtttcaaaatcaaggatattcagcttgaaactgaggcgactgagtgggctggtttccga
gtcgatcaagaccaactctacctacgtcatgattttcttgtgctgcacaacagtggtttc
gaagaatccatgaagttcaagaagttgacgaatgcccagaggtccggtttaaatcagatt
cctaaccgtcgatttactttgtggtggtctccaacaattaatcgtgcgaacgtctacgtt
ggcttccaggttcaactagacctgactggaatattcttacacggcaagatcccaacctta
aagatttcactcattcagattttccgcgctcacttgtggcaaaagatccatgagtctgtt
gtgatggatctctgtcaagtgtttgaccaggaattggagcagttgggtattgaaacagtg
caaaaggagaccatccaccctaggaaatcgtataagatgaatagctcatgtgcggatatc
cttctatttgctacccataagtggaatgttacgaggccctctcttctgttcgataccaag
gacgtcatcgaaccgactacgacaaacaaattttggttggatgtacagttacggtatggt
gactacgattctcatgacatcgagagatatgttcgtgccaagtatctcgattatactaca
gatagcatgagcatatatccatccgcaactggacttatgatcggcatcgacttggcttac
aacctttattccgcctatggtcagtatttccctgggctgaaggccctggtgcaacaagct
atggcaaagatcatgaaggcaaaccctgctttatatgtcctaagggaacgtatccggaag
ggtctccaactctatgcgtcggaaagcaaccaagaattcttgaattcccagaattactct
gaactttttagtaaccaaatccaactcttcattgacgacaccaacgtctaccgtgtgaca
atccataaaacattcgagggtaatttgacgaccaagccaatcaacggtgccattttcata
ttcaacccgcgcacgggtcagctgttcctgaaaattatccacacgagcgtctgggctggc
caaaaacgtctgggccaattagctaaatggaaaacggcggaagaagttgcagctcttatc
agatctttgccagtcgaagaacagccgaagcaactgatagttaccaggaagggtctcctt
gatcctctcgaagtgcaccttctcgatttccccaacatatctatcagagcatctgagctt
cagctacctttccaggctgcaatgaaggttgagaagcttgctgacatgatcctccgagcg
acagagccacagatggtgcttttcaacctctacgatgagtggctgaagactatctcgtcg
tacactgccttctcccgccttattcttatcctcagagccttgcatgtcaactctgacaaa
actaagatactactgcgacctgataagatggttattactcaagagcaccatatctggcca
acgctgtccgatgaggactggatcaaggtcgaagtacagcttcgtgacttgattctgaac
gactatggcaagaagaataacgtcaacactcagagtctgactagcagcgaagttcgggac
attattcttggtatggaaattagtgcgccatccatgcagcgtcagcaggctgccgaaatt
gagaagcaacaagacgaacaaaagcagctcaccgctgtcacaaccaaaacccaaaatgtc
cgaggagaagaaatcgttgttacgacaacttctcagtacgagcaacaagcatttgcgtcc
aagaccgaatggcgtactcgtgctattgccacctcaaatcttcgaacccgagccaacaac
atctatatttcttccgatgatatacaagagggccactatacatatatcatgccaaagaat
gttttgaagcgattcatcactatcgcggatctgcgagtacaggttgctggatatctgtac
ggtgcctcgccgcctgacaatgaccaagtgaaggagatacggacgatcgtgatgatccca
caagttggaaatacccgcgatatacagctgtcacatcaactcccgcaacatgagtatctc
aattcgctggaacctcttggtatcattcacacactctccggaaacgagccgtcatatatg
acggcgatggatgttacacagcatgcacgcctcatgaatgcgcattcctcctgggataaa
aagactgtgacgatgactgtagcgttcactccgggttcggtgtcgttgagcgcatgggcc
ctaaccccccagggatataaatggggagccgaaaacaaggatacttcttcggatcaacct
caaggtttctcgactagcatgggagaaaaatgtcaactcttgcttagtgataaaatacga
ggctactttttagttccagagaataatgtctggaactatagttttatgggaagctcattt
agcaacgtggaaaaacgaccggtatatgtgaagattgatacccctttgcgtttctacgat
gaccaacaccgcccgctacatttccaaaatttcgcggagttagaagatatctgggttgat
agggttgataactttgcatga
DBGET
integrated database retrieval system
