KEGG   Paracoccidioides brasiliensis: PADG_04672
Entry
PADG_04672        CDS       T03549                                 
Name
(RefSeq) ATP-dependent RNA helicase SUB2
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03013  Nucleocytoplasmic transport
pbn03015  mRNA surveillance pathway
pbn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PADG_04672
  09122 Translation
   03013 Nucleocytoplasmic transport
    PADG_04672
   03015 mRNA surveillance pathway
    PADG_04672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbn03019]
    PADG_04672
   03041 Spliceosome [BR:pbn03041]
    PADG_04672
Enzymes [BR:pbn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PADG_04672
Messenger RNA biogenesis [BR:pbn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PADG_04672
Spliceosome [BR:pbn03041]
 Complex C
  Other components
   EJC/TREX
    PADG_04672
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PADG_04672
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 CMS1
Other DBs
NCBI-GeneID: 22583737
NCBI-ProteinID: XP_010760095
UniProt: C1GCF0
LinkDB
Position
Unknown
AA seq 443 aa
MSHEEDLIDYSDEELQATDAAATSIAPTGTNGAALKKEGDLTVSGVRADKKGSYVGIHST
GFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLH
QLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKD
NYPNIVVGTPGRLNALVRDKKLSLRSIKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQ
VMMFSATLSQEVRPICKKFMRNPLEVYVDDDTKLTLHGLLQYYIKLSESEKNRKLNELLD
SLEFNQVIIFVKSTQRATELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVA
TDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDI
EKRFEVALPEYPEGGVDSSAYMA
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtctcacgaagaagatctcattgattattccgatgaggagcttcaggcaactgatgct
gctgcaacgtccatagccccaactggtaccaacggcgctgctcttaaaaaagagggtgac
ttgacggtatctggcgtgagagccgataagaaaggaagttatgttggtattcattcgact
ggcttccgcgatttcctcctaaaaggagaacttttgcgtgcgatcaccgattgcggcttc
gaacatccatcggaggtccaacaagtttgcatcccgactgctattctgaatgtcgatgtt
ctgtgccaggctaaatccggtcttggaaaaactgccgtttttgttctcacaacacttcac
caactggaaccagttcctggcgaatgctcgatacttgttatgtgtcacacccgagagctg
gcatatcagatcaaaaacgaatatgcccggtttagtaaatatcttccagatgtgaagact
gccgttttctatggtggaactccaatgcagaaggatattgaattgctctcttcgaaggac
aattatcccaacattgttgttggcacccctggcagattgaatgctcttgttcgtgacaag
aaactctcccttcgaagcattaaggcgttcgttctcgatgagtgcgataagatgttggat
caaatcgacatgcgacgtgacgttcaggagattttccgtgccaccccagctgacaaacag
gttatgatgttcagcgctaccctctcgcaggaagtccggcccatttgcaagaagtttatg
cgcaatcccctcgaggtgtatgttgatgatgacactaagctgaccctccatggtcttcta
caatactacattaagctcagcgaatcagagaaaaaccgaaagttgaacgagctattagat
agccttgagttcaaccaagtcatcatcttcgttaagagcacccaacgtgcgaccgagtta
gataagcttcttcgtgaatgcaacttccccagtatcgctgtccactccggcgtttcccag
gaagagcgcatcaaacgatacaaggagttcaaagagttcaacaagcgtatctgcgtggca
acggacgttttcggtcgtggcatcgatattgaacgaatcaatttggccatcaactacgac
ttgcccgcggatgcggattcctaccttcaccgtgttggtcgtgctggtcgtttcggtacc
aagggtctagctatctctttcgtaagcagcgagcaagaccaagaagttctcaaggacatc
gaaaagcgatttgaagttgcccttcctgaatatcccgaaggcggcgtcgactccagcgct
tatatggcataa

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