Paracoccidioides brasiliensis: PADG_04788
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Entry
PADG_04788 CDS
T03549
Name
(RefSeq) ATP-dependent RNA helicase ECM16
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
pbn
Paracoccidioides brasiliensis
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbn03009
]
PADG_04788
Enzymes [BR:
pbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PADG_04788
Ribosome biogenesis [BR:
pbn03009
]
Eukaryotic type
90S particles
Helicases
PADG_04788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
Helicase_C
HA2_N
DEAD
OB_NTP_bind
AAA_22
AAA_23
AAA_19
ResIII
nSTAND3
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
22583833
NCBI-ProteinID:
XP_010760379
UniProt:
C1GCR6
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MQKFVPRQRKHKNKLKGNQDAAQQDTNVTELAASTKSEKEKRQKLKAELQAQQQPKISGK
KQKRLAKYIETKLKKDENLALLKKLAESKIDTSQLQSSRNLGKSKDKRSRSSALNNKDSS
GSVQRAPSYDNEGDAIKPVKSASVNKSTSVVSCHINPSISAIGSGLKRPLEVGEDGFPVI
KKRKRAPKRKLILEEPSWEGFESDEASNAATEDSGAGSGSGMSDSGTDGSGNNMKPGHSE
SEDGEEDEGDDQPPSSADDSGKERVIRPRNSAFKAWAVQQINDAVGFKPTEHNLHPDPLP
LPKKQARPLPVEEEPLPAELQIPKGNPNRKAFAVQVNRPENIQSSRLGLPVVGEEQKIME
AIHNNPCVVIWGATGSGKTTQLPQFLFEAGYGNPDSPNPGMIGITQPRRVAAVSMAKRVA
DELGQYSDQVSYQIRFESTESSKTAIKFMTDGVMIREIAQDFSLSKYSIIIIDEAHERSV
NTDILIGMVSRIVDLRKTIHEENSSLKPLKLVIMSATLRISDFLQNENLFRQGRPPLVQA
EGRQYPVTIHFARRTHRDYVEEAFRKVSKGHKKLPPGAFLVFLTGQGEIKDLSKRLKQKF
RSTHASETFQGKVKLSAAEAPLETEDIELGTTTGAGGDEDGDSDIEITGLDNDENDDDDF
DHEEGVVDSRTKVHVLPLYSQLPTKEQMKVFEPPPEGSRLIVLATNVAETSLTIPGIRYV
FDCGRSKEKQYDVSTGVQSFQVGWISKASASQRAGRAGRTGPGHCYRLYSSAVFEGEFEE
YTEPEILRTPIEGVVLQMKTMGLHHVINFPFPTPPNRTSLANAEKLLRNLGALSVDGQVT
ETGRHLSLYPLSPRFGKMLQIGHQHGCIPYVVAMVSALAVSDLFIQENQLDLNPVKKEGD
EDDKIYTNADRLEDTAREMRRKDYDRSRRIFSKYDDKSDALKSLAAVCAYAYASDGESFC
SQMFLRPNAMKEASQLRQQLYEIVRSNNPGIMDPFKSRLLEPSEKQLRALKQITAAGFID
HIAIRADMAPVPPEIPRKPRRAIDVPYLTLFSSRDKPAKGLDEKAVYIHPASVLSHLSVA
ELPQYLIYSHLQQSTPNAISDTPTKVRMFPLTAVSGLQLSALAHGTPLVEYGKPIGKIES
VAGAPDKRECWVIPFLKGDPGSVGWPLPAKKVIQKKDRKHGWVIEKFIK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatttgtccctcgacagcggaagcataagaataaattaaagggaaaccaagat
gcggcacagcaggataccaatgtcacggagcttgcggcgagtaccaaatcggagaaggaa
aagcggcagaaattgaaagcagagctacaggcgcagcagcagccaaagatttctggtaaa
aaacaaaaaagacttgctaaatatatcgaaactaaactcaagaaggatgaaaacctcgcc
ctcctcaagaagctcgcagaatcgaaaatagataccagtcaattacaaagttctcgaaat
ttaggcaaatccaaggacaaaaggtctcgatcttcagcgctgaataacaaagatagcagt
ggctccgttcaacgggcgccatcttatgacaacgagggagatgctataaaacctgtcaag
tctgcctccgttaataaatctaccagtgtcgtcagctgccatattaacccttcaatatca
gctattggaagtggtttgaaacggcctctggaggttggggaagatggattcccagttatc
aagaagcgcaaacgtgcgccgaagcgaaagcttatattagaggaaccctcctgggaaggg
ttcgagagtgatgaagctagcaatgccgcgacagaagactcaggcgctggatctggtagt
ggtatgagtgattctgggacagacggttccgggaacaacatgaaaccgggacatagcgaa
agtgaagatggtgaggaagacgaaggagatgatcagccaccctcgtctgctgacgattcc
ggtaaggagagagtaattcgaccgcgaaattctgcattcaaagcgtgggcggtacaacaa
ataaacgatgcagtaggctttaagcctactgaacataatcttcaccccgatcccttgcca
ttgccaaagaagcaagcaaggccactcccagtcgaggaagagcctttgccagctgaattg
caaataccaaagggtaatccaaatagaaaggcctttgctgtccaggtaaatcggccagaa
aatatacaatcatcacgtctgggtttacctgtcgtaggggaggagcaaaagatcatggaa
gcgatccataataatccatgtgttgttatatggggagctactggaagtggcaaaactacg
cagctaccgcagtttctcttcgaagcaggatatggaaatccggacagcccaaatccgggg
atgatcggaattactcaacccagacgagtcgcggctgtcagtatggcgaaacgagtagcg
gatgagctgggtcaatattcagatcaagtatcataccagatccgatttgaaagtacagaa
tccagcaaaacagcaataaaattcatgactgatggtgttatgattcgagaaattgcccag
gacttttccctttccaaatattcgattattatcattgacgaggcccacgaaaggagtgtg
aacacagatattctcattgggatggtcagcagaatagttgatctaaggaagactatccac
gaagaaaactcctctctaaagccactgaaattggtaattatgtctgctacactacgtatt
tcagacttcctacaaaatgaaaaccttttccgacagggacgaccacctttagtgcaggcc
gagggacgtcaatacccagtcaccattcactttgcgcgccggacacaccgagactatgtt
gaggaggctttccgaaaagtatccaagggacacaaaaaattaccaccaggagcatttctc
gtttttctgactggacaaggcgaaatcaaggacttatccaaacgtcttaagcaaaagttc
agatctacgcacgcttctgaaaccttccaggggaaggtgaaactgtcagcagcggaagcc
ccccttgaaactgaggatattgaacttggaacaacaacaggcgcggggggtgatgaggac
ggtgacagcgatattgagattaccggcttagacaatgatgaaaatgacgacgatgacttc
gaccacgaagagggtgttgttgactcacgaacaaaagtccatgtccttcctctttattcc
cagcttccgacgaaagaacagatgaaagttttcgagcctccgcctgagggttcccgtctc
attgtgctcgccaccaacgttgcagaaaccagtttaaccattcccggtatcagatacgta
ttcgattgcggacgctccaaagagaagcagtacgacgtctcaactggagttcagagcttt
caggtcggatggatcagtaaagctagcgcgagtcagcgtgctggacgggctggaagaaca
ggccccgggcactgctaccggctctactcctctgctgtctttgaaggtgaatttgaagag
tataccgaaccggaaatattgcgaaccccaattgaaggagttgtcctgcagatgaaaacc
atgggacttcatcatgttatcaatttcccttttccaacaccgccaaatagaactagtctc
gctaatgcagaaaagctgctacgaaaccttggggccctttccgtagatggccaggtcact
gagacaggccgccatctcagcctctaccccctctccccacgattcggtaagatgcttcag
attggccatcagcatggctgcataccctacgtcgtagctatggtttccgccctcgcagta
tccgacctcttcatacaagaaaatcagctggatctcaaccccgtcaagaaggaaggggat
gaagatgataaaatctacaccaacgcagataggctcgaggacactgcaagagaaatgaga
cggaaggactacgaccgatcccgccgtatctttagcaaatacgacgacaaatccgatgcc
ctcaaatctcttgcagccgtctgcgcctacgcatatgcgtctgatggcgaatccttctgt
tctcaaatgttcctccgtcccaacgcaatgaaagaagcctcccaactgcgccaacagctt
tacgaaattgtccgcagcaacaaccctggtatcatggatccatttaagtcccgcctcctc
gaaccatccgagaaacaactccgcgccctcaaacaaatcaccgccgcaggattcatcgac
cacatcgcaatccgcgctgacatggccccggtccctccagaaattccccgcaagccccga
agggcgattgacgtcccatatctaactctcttctcatcccgtgacaagcccgctaaggga
ctcgatgaaaaggccgtatatattcatcccgcctccgtcctctcgcatctctcagttgct
gaactcccacaatatctcatctactcacatctccaacaatccactcccaatgccatatct
gataccccaacgaaagtccgaatgttccccctaactgctgtaagcgggctgcagctctct
gctttggcacatgggacacccctggttgaatatgggaaaccgattgggaagattgagtct
gttgctggtgcgccggataaacgcgagtgttgggttattccctttttaaagggggatccg
ggaagcgttgggtggccgttaccggcgaagaaggtaatacagaaaaaggataggaagcat
gggtgggtcattgagaagtttattaagtag
DBGET
integrated database retrieval system
