Paracoccidioides brasiliensis: PADG_04796
Help
Entry
PADG_04796 CDS
T03549
Name
(RefSeq) pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
pbn
Paracoccidioides brasiliensis
Pathway
pbn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pbn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PADG_04796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbn03021
]
PADG_04796
03041 Spliceosome [BR:
pbn03041
]
PADG_04796
03036 Chromosome and associated proteins [BR:
pbn03036
]
PADG_04796
Transcription machinery [BR:
pbn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PADG_04796
Spliceosome [BR:
pbn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PADG_04796
Complex B
PADG_04796
Complex C
U2 SnRNP specific factors
PADG_04796
Chromosome and associated proteins [BR:
pbn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PADG_04796
TFTC complex
PADG_04796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_BBS7
DUF7623
Motif
Other DBs
NCBI-GeneID:
22583840
NCBI-ProteinID:
XP_010760382
UniProt:
C1GCS4
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MATTSSLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRTLF
SQDVFGIIRTLAAFRLAGGSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRR
VIPGQYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALD
VGYDNPIFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRKWSDPVDRSATM
LFQVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKM
RGAFFFLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLF
VASETGNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSL
NPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKL
TREDEFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI
RHIHADRRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMS
GTVTCLSLGEVPKGRARSSFLAVGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMA
MADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKAV
LALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL
ENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKLLNDSDAVNGDATVLP
PEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAAVSFSSQDDETFLVVG
TGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVR
IYDLGMRQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQESVTYVVYKSQENRLIPFVDDV
ISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQYLQGAPNR
LNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVGMLIPFISREEVDFFQSLEMQL
AAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPNDKKQQIAGELDRSVREIERKI
AVCFTLLF
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacctcgtcgttgtttatgtactcgttgaccatccagccccctacagcgatt
actcaagcaattttgggccagttcgcggggactaaggaacagcagatcgtcactgcgtct
ggttcgaagctcacaatccaccggccagacccgacacagggaaaaattagaactctgttt
tctcaagatgtgtttggcattatccggacgctcgcggcatttaggctagctggtggcagc
aaagattacatcatcatcggatctgactctgggcggattaccatcatcgaatatgtacct
tcccagaaccgattcaacagaatccatctcgagactttcgggaaatcgggcattcgacgc
gttatccctggtcagtacttagctgttgatccaaaaggaagagcatgtttaattgcctcg
gtggagaaaaacaagttggtctatgtcctcaaccgaaatacacaagctgagttgacgata
tcctcgccattggaggcccataaaccccagactctggttttcgccttgacagctctggat
gtcggttatgacaatccgatatttgcggctttggaagttgaatacactgaagccgaccaa
gacccaactgggcaagcctatgaggagcttgaaaagcaattagtttattacgagctcgat
ctagggttgaaccatgttgttaggaaatggtcggatcctgttgaccgctccgcaactatg
ctattccaggttcctggtggtgcagatggtcctagtggttgtcttgtgtgtgctgaggac
aacatcacctaccgtcactcaaatcaggatgccttccgcgtaccgataccccgtcgcagt
ggacctacggaaaacccagagagaaaacgatgtattgtcgccggagtcatgcataaaatg
cgcggcgcctttttcttcttgctgcaaaccgaggacggtgatctcttcaaggttactatt
gatatggttgaagatgataacggacaaataacaggggaagtcagaagattaaaactcaaa
tatttcgacaccgttccaatcgcttcaagtttatgcattttgaagagcgggttccttttc
gtcgccagtgaaacgggaaatcatcacttttaccaatttgaaaaactgggagatgatgac
gatgaaatcgagtttactagcgactcgttctccgccaatccttctgaaccgctgcctcct
gtttatttccacccacgactctctgaaaatgtgcatcttgtcgaaaatgtgaattctctc
aatccattgatggattgcaagatcacaaacttgacggaagatgatgcaccccaaatatat
actatttgtggtacaggggcaaggagcagcttcaggactcttaagcacggcttggaagtt
actgaaatcgtggagtcggaactaccgagtgttccatctgcagtttggacctctaagctc
actcgcgaggacgaattcgatgcttacattattttgtctttttccaatggcactctcgtc
ctcagtattggagaaactgtggaagaagtcacagataccggcttcctatcctcggcacca
accctggcggttcagcaacttggagaggattctctcatccaagtgcatcccaagggaata
cgacatatccatgcagatagacgagtgaacgaatggcctgcccctcagcatcgttccatt
gttgctgcgactacaaatgagcggcaagtcgccgttgcactaagctctggggagattgtg
tactttgaaatggacacggatggttctcttgcggagtacgatgagaaaagagaaatgtcc
ggcacagttacttgtctcagcctgggagaggttccgaaagggcgtgcaaggagttctttc
ctcgctgtgggctgcgacgactctaccgtcagaattctgagccttgatccggactcaaca
ctcggaaataagtccgtccaggcacttacatccgctccatctgcactgtcaattatggca
atggctgattccacgtctggtgggtccacgctttatctacatatcggcctctattcgggc
atctatcttcgcacggtgcttgatgaggtgacgggagaactatccgatactcgcaccaga
ttcctcggtttaaagcctgttaaactcttccaagtttctgttaaggagcaaaaggccgtt
ctcgcgttgagctcacgtccttggcttgggtattcggatctccaaacgaaggcatttatg
cttacacctttagattatgtcggtctagaatggggttggaacttcagcagtgagcagtgc
gttgaaggcatggttggtatccaaggacaaaacctgagaatattctctattgaaaaattg
gagaacaatctgcttcaagagacaatctcgctcacttacacaccgcgccaattcattaaa
caccctgagcagccactcttttatgtcattgaagcagacaataatatcctttcgccggca
acaaggaccaagcttctcaacgactcagatgctgtcaacggcgatgcaacggtgttacca
cccgaggactttggctatccacgaggaacgggacattgggcgtcatgcatacagattgtc
gatccagtaaattcaaaaagcgtagtttcgcagatagagctggaagaaaatgaagctgcc
gttagtgtggccgctgtctcgttctcgagccaagatgatgaaacattcttggtagtaggg
actggaaaagatatggtagttaatccccgatcatgttcagctgggtttatccatatctac
cggttccaggaagacggcaaagaactggaattcattcataaaacgaaggttgagcaacca
cccgtggctcttcttggctttcaggggcgtcttctggcaggtattggcacagatgtcaga
atttacgacttgggaatgaggcaaatgctccgtaagtgccaggcttcagttgtcccgcac
cttgttgtcggcctgcaaacacaaggcagtcggattatcgtgagcgatgttcaggaaagc
gtcacgtatgtcgtctacaagtctcaggaaaatcgcctgattccattcgttgatgatgtt
atttcccgttggaccacttgcacgacaatggtggattacgaaactgttgctggaggagac
aagtttgggaatctgtggctgctccggtgtcccgccaaggcatcggaagaagctgatgag
gatgggtcaggggcccatctaattcatgagcgacaataccttcaaggtgccccgaacaga
ctaaatctcgttgctcacttctatccccaggatttgcccaccagcatacagaaggcacaa
ttagtcacggggggacgagatatcctcgtctggacaggacttcaagggacggtggggatg
ttgataccattcattagccgggaagaagtggattttttccaaagtctcgagatgcagctt
gccgcccagaatcctccgctcgctggacgagatcatctaatatataggagttactatgct
cccgcaaagggcaccatcgatggcgatctctgcgaaacctatcttttgcttccaaatgac
aagaaacaacaaattgctggagagttggacaggtcggtacgagaaattgagcggaaaatt
gcagtatgttttacccttctgttttag
DBGET
integrated database retrieval system