KEGG   Paracoccidioides brasiliensis: PADG_04796
Entry
PADG_04796        CDS       T03549                                 
Name
(RefSeq) pre-mRNA-splicing factor rse1
  KO
K12830  splicing factor 3B subunit 3
Organism
pbn  Paracoccidioides brasiliensis
Pathway
pbn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pbn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PADG_04796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pbn03021]
    PADG_04796
   03041 Spliceosome [BR:pbn03041]
    PADG_04796
   03036 Chromosome and associated proteins [BR:pbn03036]
    PADG_04796
Transcription machinery [BR:pbn03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     PADG_04796
Spliceosome [BR:pbn03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PADG_04796
 Complex B
    PADG_04796
 Complex C
   U2 SnRNP specific factors
    PADG_04796
Chromosome and associated proteins [BR:pbn03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     PADG_04796
    TFTC complex
     PADG_04796
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_BBS7 DUF7623
Other DBs
NCBI-GeneID: 22583840
NCBI-ProteinID: XP_010760382
UniProt: C1GCS4
LinkDB
Position
Unknown
AA seq 1208 aa
MATTSSLFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKIRTLF
SQDVFGIIRTLAAFRLAGGSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGIRR
VIPGQYLAVDPKGRACLIASVEKNKLVYVLNRNTQAELTISSPLEAHKPQTLVFALTALD
VGYDNPIFAALEVEYTEADQDPTGQAYEELEKQLVYYELDLGLNHVVRKWSDPVDRSATM
LFQVPGGADGPSGCLVCAEDNITYRHSNQDAFRVPIPRRSGPTENPERKRCIVAGVMHKM
RGAFFFLLQTEDGDLFKVTIDMVEDDNGQITGEVRRLKLKYFDTVPIASSLCILKSGFLF
VASETGNHHFYQFEKLGDDDDEIEFTSDSFSANPSEPLPPVYFHPRLSENVHLVENVNSL
NPLMDCKITNLTEDDAPQIYTICGTGARSSFRTLKHGLEVTEIVESELPSVPSAVWTSKL
TREDEFDAYIILSFSNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLIQVHPKGI
RHIHADRRVNEWPAPQHRSIVAATTNERQVAVALSSGEIVYFEMDTDGSLAEYDEKREMS
GTVTCLSLGEVPKGRARSSFLAVGCDDSTVRILSLDPDSTLGNKSVQALTSAPSALSIMA
MADSTSGGSTLYLHIGLYSGIYLRTVLDEVTGELSDTRTRFLGLKPVKLFQVSVKEQKAV
LALSSRPWLGYSDLQTKAFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL
ENNLLQETISLTYTPRQFIKHPEQPLFYVIEADNNILSPATRTKLLNDSDAVNGDATVLP
PEDFGYPRGTGHWASCIQIVDPVNSKSVVSQIELEENEAAVSVAAVSFSSQDDETFLVVG
TGKDMVVNPRSCSAGFIHIYRFQEDGKELEFIHKTKVEQPPVALLGFQGRLLAGIGTDVR
IYDLGMRQMLRKCQASVVPHLVVGLQTQGSRIIVSDVQESVTYVVYKSQENRLIPFVDDV
ISRWTTCTTMVDYETVAGGDKFGNLWLLRCPAKASEEADEDGSGAHLIHERQYLQGAPNR
LNLVAHFYPQDLPTSIQKAQLVTGGRDILVWTGLQGTVGMLIPFISREEVDFFQSLEMQL
AAQNPPLAGRDHLIYRSYYAPAKGTIDGDLCETYLLLPNDKKQQIAGELDRSVREIERKI
AVCFTLLF
NT seq 3627 nt   +upstreamnt  +downstreamnt
atggcgaccacctcgtcgttgtttatgtactcgttgaccatccagccccctacagcgatt
actcaagcaattttgggccagttcgcggggactaaggaacagcagatcgtcactgcgtct
ggttcgaagctcacaatccaccggccagacccgacacagggaaaaattagaactctgttt
tctcaagatgtgtttggcattatccggacgctcgcggcatttaggctagctggtggcagc
aaagattacatcatcatcggatctgactctgggcggattaccatcatcgaatatgtacct
tcccagaaccgattcaacagaatccatctcgagactttcgggaaatcgggcattcgacgc
gttatccctggtcagtacttagctgttgatccaaaaggaagagcatgtttaattgcctcg
gtggagaaaaacaagttggtctatgtcctcaaccgaaatacacaagctgagttgacgata
tcctcgccattggaggcccataaaccccagactctggttttcgccttgacagctctggat
gtcggttatgacaatccgatatttgcggctttggaagttgaatacactgaagccgaccaa
gacccaactgggcaagcctatgaggagcttgaaaagcaattagtttattacgagctcgat
ctagggttgaaccatgttgttaggaaatggtcggatcctgttgaccgctccgcaactatg
ctattccaggttcctggtggtgcagatggtcctagtggttgtcttgtgtgtgctgaggac
aacatcacctaccgtcactcaaatcaggatgccttccgcgtaccgataccccgtcgcagt
ggacctacggaaaacccagagagaaaacgatgtattgtcgccggagtcatgcataaaatg
cgcggcgcctttttcttcttgctgcaaaccgaggacggtgatctcttcaaggttactatt
gatatggttgaagatgataacggacaaataacaggggaagtcagaagattaaaactcaaa
tatttcgacaccgttccaatcgcttcaagtttatgcattttgaagagcgggttccttttc
gtcgccagtgaaacgggaaatcatcacttttaccaatttgaaaaactgggagatgatgac
gatgaaatcgagtttactagcgactcgttctccgccaatccttctgaaccgctgcctcct
gtttatttccacccacgactctctgaaaatgtgcatcttgtcgaaaatgtgaattctctc
aatccattgatggattgcaagatcacaaacttgacggaagatgatgcaccccaaatatat
actatttgtggtacaggggcaaggagcagcttcaggactcttaagcacggcttggaagtt
actgaaatcgtggagtcggaactaccgagtgttccatctgcagtttggacctctaagctc
actcgcgaggacgaattcgatgcttacattattttgtctttttccaatggcactctcgtc
ctcagtattggagaaactgtggaagaagtcacagataccggcttcctatcctcggcacca
accctggcggttcagcaacttggagaggattctctcatccaagtgcatcccaagggaata
cgacatatccatgcagatagacgagtgaacgaatggcctgcccctcagcatcgttccatt
gttgctgcgactacaaatgagcggcaagtcgccgttgcactaagctctggggagattgtg
tactttgaaatggacacggatggttctcttgcggagtacgatgagaaaagagaaatgtcc
ggcacagttacttgtctcagcctgggagaggttccgaaagggcgtgcaaggagttctttc
ctcgctgtgggctgcgacgactctaccgtcagaattctgagccttgatccggactcaaca
ctcggaaataagtccgtccaggcacttacatccgctccatctgcactgtcaattatggca
atggctgattccacgtctggtgggtccacgctttatctacatatcggcctctattcgggc
atctatcttcgcacggtgcttgatgaggtgacgggagaactatccgatactcgcaccaga
ttcctcggtttaaagcctgttaaactcttccaagtttctgttaaggagcaaaaggccgtt
ctcgcgttgagctcacgtccttggcttgggtattcggatctccaaacgaaggcatttatg
cttacacctttagattatgtcggtctagaatggggttggaacttcagcagtgagcagtgc
gttgaaggcatggttggtatccaaggacaaaacctgagaatattctctattgaaaaattg
gagaacaatctgcttcaagagacaatctcgctcacttacacaccgcgccaattcattaaa
caccctgagcagccactcttttatgtcattgaagcagacaataatatcctttcgccggca
acaaggaccaagcttctcaacgactcagatgctgtcaacggcgatgcaacggtgttacca
cccgaggactttggctatccacgaggaacgggacattgggcgtcatgcatacagattgtc
gatccagtaaattcaaaaagcgtagtttcgcagatagagctggaagaaaatgaagctgcc
gttagtgtggccgctgtctcgttctcgagccaagatgatgaaacattcttggtagtaggg
actggaaaagatatggtagttaatccccgatcatgttcagctgggtttatccatatctac
cggttccaggaagacggcaaagaactggaattcattcataaaacgaaggttgagcaacca
cccgtggctcttcttggctttcaggggcgtcttctggcaggtattggcacagatgtcaga
atttacgacttgggaatgaggcaaatgctccgtaagtgccaggcttcagttgtcccgcac
cttgttgtcggcctgcaaacacaaggcagtcggattatcgtgagcgatgttcaggaaagc
gtcacgtatgtcgtctacaagtctcaggaaaatcgcctgattccattcgttgatgatgtt
atttcccgttggaccacttgcacgacaatggtggattacgaaactgttgctggaggagac
aagtttgggaatctgtggctgctccggtgtcccgccaaggcatcggaagaagctgatgag
gatgggtcaggggcccatctaattcatgagcgacaataccttcaaggtgccccgaacaga
ctaaatctcgttgctcacttctatccccaggatttgcccaccagcatacagaaggcacaa
ttagtcacggggggacgagatatcctcgtctggacaggacttcaagggacggtggggatg
ttgataccattcattagccgggaagaagtggattttttccaaagtctcgagatgcagctt
gccgcccagaatcctccgctcgctggacgagatcatctaatatataggagttactatgct
cccgcaaagggcaccatcgatggcgatctctgcgaaacctatcttttgcttccaaatgac
aagaaacaacaaattgctggagagttggacaggtcggtacgagaaattgagcggaaaatt
gcagtatgttttacccttctgttttag

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